Protein–RNA interactions for Protein: Q6ZMN7

PDZRN4, PDZ domain-containing RING finger protein 4, humanhuman

Predicted RBP Predictions only

Length 1,036 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN4Q6ZMN7 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
PDZRN4Q6ZMN7 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
PDZRN4Q6ZMN7 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
PDZRN4Q6ZMN7 STX3-203ENST00000529177 1571 ntTSL 2 BASIC18.67■□□□□ 0.58
PDZRN4Q6ZMN7 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PDZRN4Q6ZMN7 AC006504.4-201ENST00000592118 1568 ntBASIC18.67■□□□□ 0.58
PDZRN4Q6ZMN7 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
PDZRN4Q6ZMN7 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PDZRN4Q6ZMN7 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC18.67■□□□□ 0.58
PDZRN4Q6ZMN7 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PDZRN4Q6ZMN7 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
PDZRN4Q6ZMN7 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PDZRN4Q6ZMN7 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PDZRN4Q6ZMN7 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
PDZRN4Q6ZMN7 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC18.67■□□□□ 0.58
PDZRN4Q6ZMN7 GSN-203ENST00000373808 2664 ntTSL 2 BASIC18.67■□□□□ 0.58
PDZRN4Q6ZMN7 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PDZRN4Q6ZMN7 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC18.66■□□□□ 0.58
PDZRN4Q6ZMN7 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PDZRN4Q6ZMN7 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC18.66■□□□□ 0.58
PDZRN4Q6ZMN7 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC18.66■□□□□ 0.58
PDZRN4Q6ZMN7 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PDZRN4Q6ZMN7 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC18.66■□□□□ 0.58
PDZRN4Q6ZMN7 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PDZRN4Q6ZMN7 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PDZRN4Q6ZMN7 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PDZRN4Q6ZMN7 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC18.66■□□□□ 0.58
PDZRN4Q6ZMN7 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PDZRN4Q6ZMN7 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC18.66■□□□□ 0.58
PDZRN4Q6ZMN7 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC18.66■□□□□ 0.58
PDZRN4Q6ZMN7 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC18.66■□□□□ 0.58
PDZRN4Q6ZMN7 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
PDZRN4Q6ZMN7 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PDZRN4Q6ZMN7 MYCLP1-201ENST00000372451 1075 ntBASIC18.66■□□□□ 0.58
PDZRN4Q6ZMN7 LCK-206ENST00000373564 2137 ntTSL 5 BASIC18.66■□□□□ 0.58
PDZRN4Q6ZMN7 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PDZRN4Q6ZMN7 AC007967.2-201ENST00000432613 625 ntBASIC18.66■□□□□ 0.58
PDZRN4Q6ZMN7 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC18.66■□□□□ 0.58
PDZRN4Q6ZMN7 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC18.66■□□□□ 0.58
PDZRN4Q6ZMN7 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC18.66■□□□□ 0.58
PDZRN4Q6ZMN7 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC18.66■□□□□ 0.58
PDZRN4Q6ZMN7 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC18.66■□□□□ 0.58
PDZRN4Q6ZMN7 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC18.66■□□□□ 0.58
PDZRN4Q6ZMN7 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC18.66■□□□□ 0.58
PDZRN4Q6ZMN7 AL139424.1-201ENST00000607572 797 ntBASIC18.66■□□□□ 0.58
PDZRN4Q6ZMN7 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PDZRN4Q6ZMN7 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC18.66■□□□□ 0.58
PDZRN4Q6ZMN7 AC009336.1-201ENST00000608941 1553 ntBASIC18.66■□□□□ 0.58
PDZRN4Q6ZMN7 AC106881.1-201ENST00000605849 3329 ntBASIC18.66■□□□□ 0.58
PDZRN4Q6ZMN7 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PDZRN4Q6ZMN7 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC18.66■□□□□ 0.58
PDZRN4Q6ZMN7 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
PDZRN4Q6ZMN7 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PDZRN4Q6ZMN7 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PDZRN4Q6ZMN7 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
PDZRN4Q6ZMN7 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PDZRN4Q6ZMN7 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PDZRN4Q6ZMN7 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC18.66■□□□□ 0.58
PDZRN4Q6ZMN7 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC18.66■□□□□ 0.58
PDZRN4Q6ZMN7 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
PDZRN4Q6ZMN7 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC18.66■□□□□ 0.58
PDZRN4Q6ZMN7 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
PDZRN4Q6ZMN7 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PDZRN4Q6ZMN7 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PDZRN4Q6ZMN7 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
PDZRN4Q6ZMN7 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
PDZRN4Q6ZMN7 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
PDZRN4Q6ZMN7 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
PDZRN4Q6ZMN7 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
PDZRN4Q6ZMN7 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PDZRN4Q6ZMN7 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PDZRN4Q6ZMN7 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PDZRN4Q6ZMN7 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
PDZRN4Q6ZMN7 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
PDZRN4Q6ZMN7 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC18.65■□□□□ 0.58
PDZRN4Q6ZMN7 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PDZRN4Q6ZMN7 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC18.65■□□□□ 0.58
PDZRN4Q6ZMN7 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC18.65■□□□□ 0.58
PDZRN4Q6ZMN7 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC18.65■□□□□ 0.58
PDZRN4Q6ZMN7 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC18.65■□□□□ 0.58
PDZRN4Q6ZMN7 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC18.65■□□□□ 0.58
PDZRN4Q6ZMN7 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC18.65■□□□□ 0.58
PDZRN4Q6ZMN7 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PDZRN4Q6ZMN7 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC18.65■□□□□ 0.58
PDZRN4Q6ZMN7 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC18.65■□□□□ 0.58
PDZRN4Q6ZMN7 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
PDZRN4Q6ZMN7 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
PDZRN4Q6ZMN7 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PDZRN4Q6ZMN7 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
PDZRN4Q6ZMN7 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
PDZRN4Q6ZMN7 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC18.65■□□□□ 0.58
PDZRN4Q6ZMN7 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC18.65■□□□□ 0.58
PDZRN4Q6ZMN7 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC18.65■□□□□ 0.58
PDZRN4Q6ZMN7 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC18.65■□□□□ 0.58
PDZRN4Q6ZMN7 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC18.65■□□□□ 0.58
PDZRN4Q6ZMN7 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
PDZRN4Q6ZMN7 AC006486.2-201ENST00000624246 2199 ntBASIC18.65■□□□□ 0.58
PDZRN4Q6ZMN7 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC18.65■□□□□ 0.58
PDZRN4Q6ZMN7 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PDZRN4Q6ZMN7 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 122.3 ms