Protein–RNA interactions for Protein: Q6UWI4

SHISA2, Protein shisa-2 homolog, humanhuman

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA2Q6UWI4 PC-204ENST00000524491 1714 ntTSL 2 BASIC12.56□□□□□ -0.4
SHISA2Q6UWI4 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SHISA2Q6UWI4 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SHISA2Q6UWI4 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SHISA2Q6UWI4 AC093525.8-201ENST00000624099 1342 ntBASIC12.56□□□□□ -0.4
SHISA2Q6UWI4 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SHISA2Q6UWI4 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC12.56□□□□□ -0.4
SHISA2Q6UWI4 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SHISA2Q6UWI4 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
SHISA2Q6UWI4 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC12.56□□□□□ -0.4
SHISA2Q6UWI4 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SHISA2Q6UWI4 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SHISA2Q6UWI4 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC12.56□□□□□ -0.4
SHISA2Q6UWI4 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
SHISA2Q6UWI4 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
SHISA2Q6UWI4 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SHISA2Q6UWI4 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC12.56□□□□□ -0.4
SHISA2Q6UWI4 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SHISA2Q6UWI4 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
SHISA2Q6UWI4 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
SHISA2Q6UWI4 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SHISA2Q6UWI4 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC12.55□□□□□ -0.4
SHISA2Q6UWI4 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC12.55□□□□□ -0.4
SHISA2Q6UWI4 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SHISA2Q6UWI4 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SHISA2Q6UWI4 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SHISA2Q6UWI4 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
SHISA2Q6UWI4 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC12.55□□□□□ -0.4
SHISA2Q6UWI4 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC12.55□□□□□ -0.4
SHISA2Q6UWI4 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
SHISA2Q6UWI4 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SHISA2Q6UWI4 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC12.55□□□□□ -0.4
SHISA2Q6UWI4 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SHISA2Q6UWI4 NME9-203ENST00000383180 2133 ntTSL 2 BASIC12.55□□□□□ -0.4
SHISA2Q6UWI4 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
SHISA2Q6UWI4 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
SHISA2Q6UWI4 AC104581.4-201ENST00000623126 3052 ntBASIC12.55□□□□□ -0.4
SHISA2Q6UWI4 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
SHISA2Q6UWI4 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SHISA2Q6UWI4 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SHISA2Q6UWI4 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
SHISA2Q6UWI4 ELK2AP-201ENST00000392510 1007 ntBASIC12.55□□□□□ -0.4
SHISA2Q6UWI4 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC12.55□□□□□ -0.4
SHISA2Q6UWI4 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SHISA2Q6UWI4 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC12.55□□□□□ -0.4
SHISA2Q6UWI4 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SHISA2Q6UWI4 ACTG1P3-201ENST00000431775 1114 ntBASIC12.55□□□□□ -0.4
SHISA2Q6UWI4 CSF2RBP1-201ENST00000447905 391 ntBASIC12.55□□□□□ -0.4
SHISA2Q6UWI4 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC12.55□□□□□ -0.4
SHISA2Q6UWI4 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC12.55□□□□□ -0.4
SHISA2Q6UWI4 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC12.55□□□□□ -0.4
SHISA2Q6UWI4 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC12.55□□□□□ -0.4
SHISA2Q6UWI4 AC036164.1-201ENST00000570544 333 ntBASIC12.55□□□□□ -0.4
SHISA2Q6UWI4 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC12.55□□□□□ -0.4
SHISA2Q6UWI4 RN7SL718P-201ENST00000581254 303 ntBASIC12.55□□□□□ -0.4
SHISA2Q6UWI4 AC061975.2-201ENST00000581722 295 ntBASIC12.55□□□□□ -0.4
SHISA2Q6UWI4 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC12.55□□□□□ -0.4
SHISA2Q6UWI4 AC013467.2-201ENST00000605472 835 ntBASIC12.55□□□□□ -0.4
SHISA2Q6UWI4 WNT11-204ENST00000621122 789 ntTSL 5 BASIC12.55□□□□□ -0.4
SHISA2Q6UWI4 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SHISA2Q6UWI4 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC12.55□□□□□ -0.4
SHISA2Q6UWI4 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC12.55□□□□□ -0.4
SHISA2Q6UWI4 ABBA01031660.1-201ENST00000635219 756 ntBASIC12.55□□□□□ -0.4
SHISA2Q6UWI4 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC12.55□□□□□ -0.4
SHISA2Q6UWI4 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SHISA2Q6UWI4 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC12.55□□□□□ -0.4
SHISA2Q6UWI4 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
SHISA2Q6UWI4 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
SHISA2Q6UWI4 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SHISA2Q6UWI4 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SHISA2Q6UWI4 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SHISA2Q6UWI4 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
SHISA2Q6UWI4 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC12.55□□□□□ -0.4
SHISA2Q6UWI4 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SHISA2Q6UWI4 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SHISA2Q6UWI4 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SHISA2Q6UWI4 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
SHISA2Q6UWI4 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC12.55□□□□□ -0.4
SHISA2Q6UWI4 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SHISA2Q6UWI4 AL355312.1-201ENST00000407115 2176 ntBASIC12.54□□□□□ -0.4
SHISA2Q6UWI4 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SHISA2Q6UWI4 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
SHISA2Q6UWI4 KRT8P39-201ENST00000396270 1433 ntBASIC12.54□□□□□ -0.4
SHISA2Q6UWI4 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC12.54□□□□□ -0.4
SHISA2Q6UWI4 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SHISA2Q6UWI4 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
SHISA2Q6UWI4 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC12.54□□□□□ -0.4
SHISA2Q6UWI4 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
SHISA2Q6UWI4 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SHISA2Q6UWI4 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
SHISA2Q6UWI4 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SHISA2Q6UWI4 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
SHISA2Q6UWI4 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SHISA2Q6UWI4 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SHISA2Q6UWI4 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
SHISA2Q6UWI4 AL589702.1-201ENST00000641229 1509 ntBASIC12.54□□□□□ -0.4
SHISA2Q6UWI4 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC12.54□□□□□ -0.4
SHISA2Q6UWI4 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC12.54□□□□□ -0.4
SHISA2Q6UWI4 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SHISA2Q6UWI4 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms