Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 METTL23-207ENST00000588783 1184 ntTSL 5 BASIC17.04■□□□□ 0.32
VARS2Q5ST30 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC17.04■□□□□ 0.32
VARS2Q5ST30 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
VARS2Q5ST30 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
VARS2Q5ST30 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
VARS2Q5ST30 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
VARS2Q5ST30 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
VARS2Q5ST30 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
VARS2Q5ST30 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC17.04■□□□□ 0.32
VARS2Q5ST30 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC17.04■□□□□ 0.32
VARS2Q5ST30 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
VARS2Q5ST30 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.04■□□□□ 0.32
VARS2Q5ST30 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.04■□□□□ 0.32
VARS2Q5ST30 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
VARS2Q5ST30 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.04■□□□□ 0.32
VARS2Q5ST30 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
VARS2Q5ST30 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
VARS2Q5ST30 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
VARS2Q5ST30 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC17.03■□□□□ 0.32
VARS2Q5ST30 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
VARS2Q5ST30 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
VARS2Q5ST30 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC17.03■□□□□ 0.32
VARS2Q5ST30 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
VARS2Q5ST30 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC17.03■□□□□ 0.32
VARS2Q5ST30 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
VARS2Q5ST30 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
VARS2Q5ST30 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
VARS2Q5ST30 AP006294.1-201ENST00000415407 339 ntBASIC17.03■□□□□ 0.32
VARS2Q5ST30 HNRNPA1P23-201ENST00000491091 1133 ntBASIC17.03■□□□□ 0.32
VARS2Q5ST30 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC17.03■□□□□ 0.32
VARS2Q5ST30 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
VARS2Q5ST30 TIMM17BP1-201ENST00000545713 516 ntBASIC17.03■□□□□ 0.32
VARS2Q5ST30 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC17.03■□□□□ 0.32
VARS2Q5ST30 IFT20-216ENST00000588477 774 ntTSL 5 BASIC17.03■□□□□ 0.32
VARS2Q5ST30 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC17.03■□□□□ 0.32
VARS2Q5ST30 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC17.03■□□□□ 0.32
VARS2Q5ST30 AC099568.2-201ENST00000609194 695 ntBASIC17.03■□□□□ 0.32
VARS2Q5ST30 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC17.03■□□□□ 0.32
VARS2Q5ST30 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC17.03■□□□□ 0.32
VARS2Q5ST30 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
VARS2Q5ST30 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
VARS2Q5ST30 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
VARS2Q5ST30 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
VARS2Q5ST30 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC17.03■□□□□ 0.32
VARS2Q5ST30 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
VARS2Q5ST30 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
VARS2Q5ST30 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
VARS2Q5ST30 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
VARS2Q5ST30 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
VARS2Q5ST30 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
VARS2Q5ST30 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
VARS2Q5ST30 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
VARS2Q5ST30 Z97205.2-201ENST00000564697 1639 ntBASIC17.03■□□□□ 0.32
VARS2Q5ST30 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
VARS2Q5ST30 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
VARS2Q5ST30 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
VARS2Q5ST30 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.03■□□□□ 0.32
VARS2Q5ST30 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
VARS2Q5ST30 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
VARS2Q5ST30 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
VARS2Q5ST30 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC17.02■□□□□ 0.32
VARS2Q5ST30 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
VARS2Q5ST30 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
VARS2Q5ST30 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
VARS2Q5ST30 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC17.02■□□□□ 0.32
VARS2Q5ST30 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
VARS2Q5ST30 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
VARS2Q5ST30 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
VARS2Q5ST30 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
VARS2Q5ST30 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
VARS2Q5ST30 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC17.02■□□□□ 0.32
VARS2Q5ST30 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
VARS2Q5ST30 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC17.02■□□□□ 0.32
VARS2Q5ST30 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC17.02■□□□□ 0.32
VARS2Q5ST30 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
VARS2Q5ST30 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC17.02■□□□□ 0.32
VARS2Q5ST30 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC17.02■□□□□ 0.32
VARS2Q5ST30 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC17.02■□□□□ 0.32
VARS2Q5ST30 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
VARS2Q5ST30 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
VARS2Q5ST30 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
VARS2Q5ST30 AL606495.2-201ENST00000605867 535 ntBASIC17.02■□□□□ 0.32
VARS2Q5ST30 AC048344.4-201ENST00000619744 527 ntBASIC17.02■□□□□ 0.32
VARS2Q5ST30 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
VARS2Q5ST30 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
VARS2Q5ST30 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
VARS2Q5ST30 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
VARS2Q5ST30 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC17.02■□□□□ 0.31
VARS2Q5ST30 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
VARS2Q5ST30 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC17.02■□□□□ 0.31
VARS2Q5ST30 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.02■□□□□ 0.31
VARS2Q5ST30 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
VARS2Q5ST30 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
VARS2Q5ST30 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
VARS2Q5ST30 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC17.02■□□□□ 0.31
VARS2Q5ST30 AC084018.2-201ENST00000613093 2607 ntBASIC17.01■□□□□ 0.31
VARS2Q5ST30 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
VARS2Q5ST30 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
VARS2Q5ST30 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
VARS2Q5ST30 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms