Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PTPN20Q4JDL3 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PTPN20Q4JDL3 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC16.94■□□□□ 0.3
PTPN20Q4JDL3 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
PTPN20Q4JDL3 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
PTPN20Q4JDL3 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC16.94■□□□□ 0.3
PTPN20Q4JDL3 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PTPN20Q4JDL3 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
PTPN20Q4JDL3 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PTPN20Q4JDL3 AC004987.2-201ENST00000395959 1148 ntBASIC16.94■□□□□ 0.3
PTPN20Q4JDL3 AL512356.2-201ENST00000546955 174 ntBASIC16.94■□□□□ 0.3
PTPN20Q4JDL3 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
PTPN20Q4JDL3 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
PTPN20Q4JDL3 MIR4453-201ENST00000584019 89 ntBASIC16.94■□□□□ 0.3
PTPN20Q4JDL3 AC007967.4-201ENST00000614700 386 ntBASIC16.94■□□□□ 0.3
PTPN20Q4JDL3 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC16.94■□□□□ 0.3
PTPN20Q4JDL3 AC079781.4-201ENST00000641908 219 ntBASIC16.94■□□□□ 0.3
PTPN20Q4JDL3 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
PTPN20Q4JDL3 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC16.94■□□□□ 0.3
PTPN20Q4JDL3 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PTPN20Q4JDL3 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PTPN20Q4JDL3 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.94■□□□□ 0.3
PTPN20Q4JDL3 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PTPN20Q4JDL3 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC16.94■□□□□ 0.3
PTPN20Q4JDL3 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PTPN20Q4JDL3 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
PTPN20Q4JDL3 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC16.93■□□□□ 0.3
PTPN20Q4JDL3 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PTPN20Q4JDL3 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.93■□□□□ 0.3
PTPN20Q4JDL3 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PTPN20Q4JDL3 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PTPN20Q4JDL3 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC16.93■□□□□ 0.3
PTPN20Q4JDL3 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC16.93■□□□□ 0.3
PTPN20Q4JDL3 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PTPN20Q4JDL3 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PTPN20Q4JDL3 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PTPN20Q4JDL3 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PTPN20Q4JDL3 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PTPN20Q4JDL3 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PTPN20Q4JDL3 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC16.93■□□□□ 0.3
PTPN20Q4JDL3 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
PTPN20Q4JDL3 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PTPN20Q4JDL3 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
PTPN20Q4JDL3 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PTPN20Q4JDL3 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PTPN20Q4JDL3 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC16.93■□□□□ 0.3
PTPN20Q4JDL3 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PTPN20Q4JDL3 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC16.93■□□□□ 0.3
PTPN20Q4JDL3 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC16.93■□□□□ 0.3
PTPN20Q4JDL3 AC026979.3-201ENST00000607315 403 ntBASIC16.93■□□□□ 0.3
PTPN20Q4JDL3 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC16.93■□□□□ 0.3
PTPN20Q4JDL3 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC16.93■□□□□ 0.3
PTPN20Q4JDL3 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
PTPN20Q4JDL3 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC16.93■□□□□ 0.3
PTPN20Q4JDL3 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PTPN20Q4JDL3 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PTPN20Q4JDL3 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC16.93■□□□□ 0.3
PTPN20Q4JDL3 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC16.93■□□□□ 0.3
PTPN20Q4JDL3 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PTPN20Q4JDL3 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
PTPN20Q4JDL3 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
PTPN20Q4JDL3 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PTPN20Q4JDL3 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
PTPN20Q4JDL3 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PTPN20Q4JDL3 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
PTPN20Q4JDL3 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
PTPN20Q4JDL3 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PTPN20Q4JDL3 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PTPN20Q4JDL3 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
PTPN20Q4JDL3 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PTPN20Q4JDL3 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
PTPN20Q4JDL3 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
PTPN20Q4JDL3 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PTPN20Q4JDL3 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.92■□□□□ 0.3
PTPN20Q4JDL3 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
PTPN20Q4JDL3 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
PTPN20Q4JDL3 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PTPN20Q4JDL3 REXO1L1P-202ENST00000608646 1974 ntBASIC16.92■□□□□ 0.3
PTPN20Q4JDL3 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PTPN20Q4JDL3 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PTPN20Q4JDL3 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PTPN20Q4JDL3 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC16.92■□□□□ 0.3
PTPN20Q4JDL3 RBM39-205ENST00000397370 612 ntTSL 2 BASIC16.92■□□□□ 0.3
PTPN20Q4JDL3 EEF1DP4-201ENST00000446006 880 ntBASIC16.92■□□□□ 0.3
PTPN20Q4JDL3 LITAF-210ENST00000571976 548 ntTSL 2 BASIC16.92■□□□□ 0.3
PTPN20Q4JDL3 LITAF-214ENST00000574703 486 ntTSL 2 BASIC16.92■□□□□ 0.3
PTPN20Q4JDL3 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PTPN20Q4JDL3 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PTPN20Q4JDL3 AL133215.2-201ENST00000609242 977 ntBASIC16.92■□□□□ 0.3
PTPN20Q4JDL3 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PTPN20Q4JDL3 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC16.92■□□□□ 0.3
PTPN20Q4JDL3 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
PTPN20Q4JDL3 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PTPN20Q4JDL3 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PTPN20Q4JDL3 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
PTPN20Q4JDL3 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PTPN20Q4JDL3 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PTPN20Q4JDL3 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.92■□□□□ 0.3
PTPN20Q4JDL3 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PTPN20Q4JDL3 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms