Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
CTC1Q2NKJ3 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CTC1Q2NKJ3 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC17.21■□□□□ 0.35
CTC1Q2NKJ3 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CTC1Q2NKJ3 MIR1908-201ENST00000410394 80 ntBASIC17.21■□□□□ 0.35
CTC1Q2NKJ3 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC17.21■□□□□ 0.35
CTC1Q2NKJ3 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CTC1Q2NKJ3 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CTC1Q2NKJ3 MFF-223ENST00000524634 647 ntTSL 2 BASIC17.21■□□□□ 0.35
CTC1Q2NKJ3 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC17.21■□□□□ 0.35
CTC1Q2NKJ3 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC17.21■□□□□ 0.35
CTC1Q2NKJ3 AL583810.1-201ENST00000553344 1045 ntBASIC17.21■□□□□ 0.35
CTC1Q2NKJ3 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
CTC1Q2NKJ3 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC17.21■□□□□ 0.35
CTC1Q2NKJ3 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC17.21■□□□□ 0.35
CTC1Q2NKJ3 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC17.21■□□□□ 0.35
CTC1Q2NKJ3 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CTC1Q2NKJ3 ANKRD26P3-201ENST00000454044 2748 ntBASIC17.21■□□□□ 0.35
CTC1Q2NKJ3 CYP2T1P-202ENST00000641596 2535 ntBASIC17.21■□□□□ 0.35
CTC1Q2NKJ3 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC17.21■□□□□ 0.35
CTC1Q2NKJ3 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CTC1Q2NKJ3 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CTC1Q2NKJ3 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CTC1Q2NKJ3 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CTC1Q2NKJ3 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CTC1Q2NKJ3 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC17.21■□□□□ 0.35
CTC1Q2NKJ3 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CTC1Q2NKJ3 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC17.21■□□□□ 0.34
CTC1Q2NKJ3 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC17.21■□□□□ 0.34
CTC1Q2NKJ3 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC17.21■□□□□ 0.34
CTC1Q2NKJ3 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.34
CTC1Q2NKJ3 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.34
CTC1Q2NKJ3 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
CTC1Q2NKJ3 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC17.2■□□□□ 0.34
CTC1Q2NKJ3 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC17.2■□□□□ 0.34
CTC1Q2NKJ3 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CTC1Q2NKJ3 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CTC1Q2NKJ3 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CTC1Q2NKJ3 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC17.2■□□□□ 0.34
CTC1Q2NKJ3 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CTC1Q2NKJ3 KRT8P44-201ENST00000441609 1350 ntBASIC17.2■□□□□ 0.34
CTC1Q2NKJ3 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
CTC1Q2NKJ3 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CTC1Q2NKJ3 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC17.2■□□□□ 0.34
CTC1Q2NKJ3 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC17.2■□□□□ 0.34
CTC1Q2NKJ3 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC17.2■□□□□ 0.34
CTC1Q2NKJ3 RHOA-206ENST00000454011 889 ntTSL 2 BASIC17.2■□□□□ 0.34
CTC1Q2NKJ3 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC17.2■□□□□ 0.34
CTC1Q2NKJ3 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC17.2■□□□□ 0.34
CTC1Q2NKJ3 AC092337.1-201ENST00000568699 1129 ntBASIC17.2■□□□□ 0.34
CTC1Q2NKJ3 GPR182-203ENST00000622922 591 ntBASIC17.2■□□□□ 0.34
CTC1Q2NKJ3 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC17.2■□□□□ 0.34
CTC1Q2NKJ3 AL033527.5-201ENST00000641382 801 ntBASIC17.2■□□□□ 0.34
CTC1Q2NKJ3 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC17.2■□□□□ 0.34
CTC1Q2NKJ3 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CTC1Q2NKJ3 IMPDH1P4-201ENST00000445028 1534 ntBASIC17.2■□□□□ 0.34
CTC1Q2NKJ3 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
CTC1Q2NKJ3 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
CTC1Q2NKJ3 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CTC1Q2NKJ3 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CTC1Q2NKJ3 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CTC1Q2NKJ3 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.2■□□□□ 0.34
CTC1Q2NKJ3 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CTC1Q2NKJ3 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CTC1Q2NKJ3 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC17.19■□□□□ 0.34
CTC1Q2NKJ3 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC17.19■□□□□ 0.34
CTC1Q2NKJ3 MST1L-201ENST00000442552 2185 ntBASIC17.19■□□□□ 0.34
CTC1Q2NKJ3 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.19■□□□□ 0.34
CTC1Q2NKJ3 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CTC1Q2NKJ3 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CTC1Q2NKJ3 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC17.19■□□□□ 0.34
CTC1Q2NKJ3 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
CTC1Q2NKJ3 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC17.19■□□□□ 0.34
CTC1Q2NKJ3 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CTC1Q2NKJ3 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CTC1Q2NKJ3 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
CTC1Q2NKJ3 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
CTC1Q2NKJ3 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
CTC1Q2NKJ3 AC092933.1-201ENST00000393644 945 ntBASIC17.19■□□□□ 0.34
CTC1Q2NKJ3 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC17.19■□□□□ 0.34
CTC1Q2NKJ3 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC17.19■□□□□ 0.34
CTC1Q2NKJ3 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC17.19■□□□□ 0.34
CTC1Q2NKJ3 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC17.19■□□□□ 0.34
CTC1Q2NKJ3 BTNL10-201ENST00000595971 695 ntBASIC17.19■□□□□ 0.34
CTC1Q2NKJ3 WNT11-204ENST00000621122 789 ntTSL 5 BASIC17.19■□□□□ 0.34
CTC1Q2NKJ3 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CTC1Q2NKJ3 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CTC1Q2NKJ3 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CTC1Q2NKJ3 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CTC1Q2NKJ3 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CTC1Q2NKJ3 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CTC1Q2NKJ3 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CTC1Q2NKJ3 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC17.19■□□□□ 0.34
CTC1Q2NKJ3 AC022188.1-201ENST00000620960 1664 ntBASIC17.19■□□□□ 0.34
CTC1Q2NKJ3 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CTC1Q2NKJ3 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CTC1Q2NKJ3 AC132872.4-202ENST00000622924 2756 ntBASIC17.18■□□□□ 0.34
CTC1Q2NKJ3 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
CTC1Q2NKJ3 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CTC1Q2NKJ3 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms