Protein–RNA interactions for Protein: Q08945

SSRP1, FACT complex subunit SSRP1, humanhuman

Known RBP Predictions only

Length 709 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1Q08945 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
SSRP1Q08945 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SSRP1Q08945 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC18.71■□□□□ 0.59
SSRP1Q08945 RPS8P6-201ENST00000426177 609 ntBASIC18.71■□□□□ 0.59
SSRP1Q08945 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC18.71■□□□□ 0.59
SSRP1Q08945 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC18.71■□□□□ 0.59
SSRP1Q08945 GATD1-206ENST00000526325 756 ntTSL 5 BASIC18.71■□□□□ 0.59
SSRP1Q08945 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC18.71■□□□□ 0.59
SSRP1Q08945 AC243562.2-201ENST00000561247 970 ntBASIC18.71■□□□□ 0.59
SSRP1Q08945 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC18.71■□□□□ 0.59
SSRP1Q08945 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SSRP1Q08945 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
SSRP1Q08945 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC18.71■□□□□ 0.59
SSRP1Q08945 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
SSRP1Q08945 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC18.71■□□□□ 0.58
SSRP1Q08945 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC18.7■□□□□ 0.58
SSRP1Q08945 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SSRP1Q08945 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SSRP1Q08945 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC18.7■□□□□ 0.58
SSRP1Q08945 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
SSRP1Q08945 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
SSRP1Q08945 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SSRP1Q08945 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SSRP1Q08945 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SSRP1Q08945 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SSRP1Q08945 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
SSRP1Q08945 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SSRP1Q08945 DNAJB3-202ENST00000449667 1266 ntBASIC18.7■□□□□ 0.58
SSRP1Q08945 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC18.7■□□□□ 0.58
SSRP1Q08945 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC18.7■□□□□ 0.58
SSRP1Q08945 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC18.7■□□□□ 0.58
SSRP1Q08945 AC026150.2-201ENST00000564693 1156 ntBASIC18.7■□□□□ 0.58
SSRP1Q08945 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC18.7■□□□□ 0.58
SSRP1Q08945 AC018529.1-201ENST00000613063 361 ntBASIC18.7■□□□□ 0.58
SSRP1Q08945 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SSRP1Q08945 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC18.7■□□□□ 0.58
SSRP1Q08945 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC18.7■□□□□ 0.58
SSRP1Q08945 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SSRP1Q08945 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
SSRP1Q08945 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
SSRP1Q08945 AP005117.1-202ENST00000581724 1908 ntBASIC18.7■□□□□ 0.58
SSRP1Q08945 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
SSRP1Q08945 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
SSRP1Q08945 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SSRP1Q08945 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SSRP1Q08945 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SSRP1Q08945 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC18.7■□□□□ 0.58
SSRP1Q08945 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SSRP1Q08945 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SSRP1Q08945 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SSRP1Q08945 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
SSRP1Q08945 GOLGA6L17P-202ENST00000614358 1398 ntBASIC18.69■□□□□ 0.58
SSRP1Q08945 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SSRP1Q08945 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC18.69■□□□□ 0.58
SSRP1Q08945 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SSRP1Q08945 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
SSRP1Q08945 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC18.69■□□□□ 0.58
SSRP1Q08945 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC18.69■□□□□ 0.58
SSRP1Q08945 AC011477.6-201ENST00000604980 1927 ntBASIC18.69■□□□□ 0.58
SSRP1Q08945 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
SSRP1Q08945 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
SSRP1Q08945 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
SSRP1Q08945 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SSRP1Q08945 SPDYE14P-201ENST00000442619 822 ntBASIC18.69■□□□□ 0.58
SSRP1Q08945 AL139010.1-201ENST00000454878 894 ntBASIC18.69■□□□□ 0.58
SSRP1Q08945 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
SSRP1Q08945 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SSRP1Q08945 NAA38-207ENST00000576861 556 ntTSL 3 BASIC18.69■□□□□ 0.58
SSRP1Q08945 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SSRP1Q08945 AL691403.2-201ENST00000618460 490 ntBASIC18.69■□□□□ 0.58
SSRP1Q08945 RAB34-224ENST00000636513 888 ntTSL 5 BASIC18.69■□□□□ 0.58
SSRP1Q08945 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC18.69■□□□□ 0.58
SSRP1Q08945 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC18.69■□□□□ 0.58
SSRP1Q08945 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
SSRP1Q08945 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SSRP1Q08945 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SSRP1Q08945 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
SSRP1Q08945 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SSRP1Q08945 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SSRP1Q08945 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC18.69■□□□□ 0.58
SSRP1Q08945 PAUPAR-201ENST00000630360 2965 ntBASIC18.69■□□□□ 0.58
SSRP1Q08945 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SSRP1Q08945 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SSRP1Q08945 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC18.69■□□□□ 0.58
SSRP1Q08945 AL136982.4-201ENST00000437689 1740 ntBASIC18.69■□□□□ 0.58
SSRP1Q08945 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SSRP1Q08945 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SSRP1Q08945 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC18.68■□□□□ 0.58
SSRP1Q08945 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SSRP1Q08945 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SSRP1Q08945 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SSRP1Q08945 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC18.68■□□□□ 0.58
SSRP1Q08945 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
SSRP1Q08945 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC18.68■□□□□ 0.58
SSRP1Q08945 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC18.68■□□□□ 0.58
SSRP1Q08945 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SSRP1Q08945 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SSRP1Q08945 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SSRP1Q08945 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SSRP1Q08945 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms