Protein–RNA interactions for Protein: Q07837

SLC3A1, Neutral and basic amino acid transport protein rBAT, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A1Q07837 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC14.6□□□□□ -0.07
SLC3A1Q07837 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SLC3A1Q07837 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SLC3A1Q07837 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC14.6□□□□□ -0.07
SLC3A1Q07837 PPT1-215ENST00000641471 2368 ntBASIC14.6□□□□□ -0.07
SLC3A1Q07837 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
SLC3A1Q07837 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SLC3A1Q07837 LINC02228-204ENST00000642115 2962 ntBASIC14.6□□□□□ -0.07
SLC3A1Q07837 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SLC3A1Q07837 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SLC3A1Q07837 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
SLC3A1Q07837 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SLC3A1Q07837 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
SLC3A1Q07837 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
SLC3A1Q07837 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC14.6□□□□□ -0.07
SLC3A1Q07837 AC098831.1-202ENST00000438821 336 ntBASIC14.6□□□□□ -0.07
SLC3A1Q07837 RPL13AP23-201ENST00000480739 586 ntBASIC14.6□□□□□ -0.07
SLC3A1Q07837 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC14.6□□□□□ -0.07
SLC3A1Q07837 CD63-204ENST00000546939 779 ntTSL 3 BASIC14.6□□□□□ -0.07
SLC3A1Q07837 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC14.6□□□□□ -0.07
SLC3A1Q07837 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC14.6□□□□□ -0.07
SLC3A1Q07837 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC14.6□□□□□ -0.07
SLC3A1Q07837 AL049840.3-201ENST00000602669 611 ntBASIC14.6□□□□□ -0.07
SLC3A1Q07837 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SLC3A1Q07837 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SLC3A1Q07837 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SLC3A1Q07837 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
SLC3A1Q07837 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC14.6□□□□□ -0.07
SLC3A1Q07837 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC14.6□□□□□ -0.07
SLC3A1Q07837 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
SLC3A1Q07837 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SLC3A1Q07837 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SLC3A1Q07837 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC14.6□□□□□ -0.07
SLC3A1Q07837 AC069224.1-201ENST00000566372 1715 ntBASIC14.6□□□□□ -0.07
SLC3A1Q07837 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
SLC3A1Q07837 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SLC3A1Q07837 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SLC3A1Q07837 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
SLC3A1Q07837 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
SLC3A1Q07837 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SLC3A1Q07837 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SLC3A1Q07837 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC14.6□□□□□ -0.07
SLC3A1Q07837 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SLC3A1Q07837 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SLC3A1Q07837 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SLC3A1Q07837 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
SLC3A1Q07837 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SLC3A1Q07837 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SLC3A1Q07837 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SLC3A1Q07837 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC14.59□□□□□ -0.07
SLC3A1Q07837 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
SLC3A1Q07837 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SLC3A1Q07837 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC14.59□□□□□ -0.07
SLC3A1Q07837 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SLC3A1Q07837 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
SLC3A1Q07837 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
SLC3A1Q07837 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SLC3A1Q07837 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC14.59□□□□□ -0.07
SLC3A1Q07837 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC14.59□□□□□ -0.07
SLC3A1Q07837 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SLC3A1Q07837 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SLC3A1Q07837 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC14.59□□□□□ -0.07
SLC3A1Q07837 KRT18P27-201ENST00000427733 1299 ntBASIC14.59□□□□□ -0.07
SLC3A1Q07837 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC14.59□□□□□ -0.07
SLC3A1Q07837 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC14.59□□□□□ -0.07
SLC3A1Q07837 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC14.59□□□□□ -0.07
SLC3A1Q07837 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SLC3A1Q07837 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC14.59□□□□□ -0.07
SLC3A1Q07837 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC14.59□□□□□ -0.07
SLC3A1Q07837 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC14.59□□□□□ -0.07
SLC3A1Q07837 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC14.59□□□□□ -0.07
SLC3A1Q07837 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SLC3A1Q07837 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SLC3A1Q07837 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SLC3A1Q07837 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SLC3A1Q07837 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SLC3A1Q07837 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
SLC3A1Q07837 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
SLC3A1Q07837 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
SLC3A1Q07837 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC14.59□□□□□ -0.07
SLC3A1Q07837 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SLC3A1Q07837 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SLC3A1Q07837 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC14.59□□□□□ -0.07
SLC3A1Q07837 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SLC3A1Q07837 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
SLC3A1Q07837 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SLC3A1Q07837 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
SLC3A1Q07837 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SLC3A1Q07837 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SLC3A1Q07837 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SLC3A1Q07837 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
SLC3A1Q07837 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SLC3A1Q07837 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
SLC3A1Q07837 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC14.58□□□□□ -0.07
SLC3A1Q07837 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC14.58□□□□□ -0.07
SLC3A1Q07837 TNRC18P2-201ENST00000417666 2714 ntBASIC14.58□□□□□ -0.07
SLC3A1Q07837 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC14.58□□□□□ -0.07
SLC3A1Q07837 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SLC3A1Q07837 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC14.58□□□□□ -0.08
SLC3A1Q07837 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC14.58□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms