Protein–RNA interactions for Protein: Q03692

COL10A1, Collagen alpha-1(X) chain, humanhuman

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL10A1Q03692 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
COL10A1Q03692 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
COL10A1Q03692 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
COL10A1Q03692 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
COL10A1Q03692 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
COL10A1Q03692 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
COL10A1Q03692 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
COL10A1Q03692 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
COL10A1Q03692 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
COL10A1Q03692 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC13.67□□□□□ -0.22
COL10A1Q03692 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
COL10A1Q03692 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC13.67□□□□□ -0.22
COL10A1Q03692 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC13.67□□□□□ -0.22
COL10A1Q03692 FAM86C2P-203ENST00000528684 1004 ntBASIC13.67□□□□□ -0.22
COL10A1Q03692 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
COL10A1Q03692 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC13.67□□□□□ -0.22
COL10A1Q03692 AL138918.1-201ENST00000568306 659 ntBASIC13.67□□□□□ -0.22
COL10A1Q03692 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC13.67□□□□□ -0.22
COL10A1Q03692 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC13.67□□□□□ -0.22
COL10A1Q03692 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC13.67□□□□□ -0.22
COL10A1Q03692 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
COL10A1Q03692 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC13.67□□□□□ -0.22
COL10A1Q03692 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
COL10A1Q03692 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
COL10A1Q03692 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC13.67□□□□□ -0.22
COL10A1Q03692 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC13.67□□□□□ -0.22
COL10A1Q03692 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
COL10A1Q03692 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
COL10A1Q03692 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
COL10A1Q03692 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
COL10A1Q03692 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC13.67□□□□□ -0.22
COL10A1Q03692 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
COL10A1Q03692 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
COL10A1Q03692 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
COL10A1Q03692 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
COL10A1Q03692 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
COL10A1Q03692 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC13.66□□□□□ -0.22
COL10A1Q03692 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
COL10A1Q03692 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
COL10A1Q03692 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
COL10A1Q03692 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
COL10A1Q03692 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
COL10A1Q03692 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
COL10A1Q03692 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
COL10A1Q03692 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
COL10A1Q03692 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC13.66□□□□□ -0.22
COL10A1Q03692 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC13.66□□□□□ -0.22
COL10A1Q03692 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
COL10A1Q03692 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
COL10A1Q03692 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
COL10A1Q03692 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
COL10A1Q03692 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
COL10A1Q03692 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
COL10A1Q03692 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
COL10A1Q03692 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
COL10A1Q03692 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC13.66□□□□□ -0.22
COL10A1Q03692 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
COL10A1Q03692 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
COL10A1Q03692 MIR648-201ENST00000385046 94 ntBASIC13.66□□□□□ -0.22
COL10A1Q03692 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC13.66□□□□□ -0.22
COL10A1Q03692 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC13.66□□□□□ -0.22
COL10A1Q03692 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
COL10A1Q03692 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
COL10A1Q03692 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
COL10A1Q03692 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
COL10A1Q03692 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
COL10A1Q03692 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
COL10A1Q03692 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC13.66□□□□□ -0.22
COL10A1Q03692 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC13.66□□□□□ -0.22
COL10A1Q03692 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
COL10A1Q03692 CITED2-204ENST00000618718 901 ntTSL 2 BASIC13.66□□□□□ -0.22
COL10A1Q03692 C20orf181-201ENST00000623918 480 ntBASIC13.66□□□□□ -0.22
COL10A1Q03692 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
COL10A1Q03692 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
COL10A1Q03692 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
COL10A1Q03692 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
COL10A1Q03692 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
COL10A1Q03692 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC13.66□□□□□ -0.22
COL10A1Q03692 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
COL10A1Q03692 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
COL10A1Q03692 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC13.66□□□□□ -0.22
COL10A1Q03692 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC13.66□□□□□ -0.22
COL10A1Q03692 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC13.66□□□□□ -0.22
COL10A1Q03692 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
COL10A1Q03692 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
COL10A1Q03692 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
COL10A1Q03692 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
COL10A1Q03692 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
COL10A1Q03692 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC13.66□□□□□ -0.22
COL10A1Q03692 AL603832.2-201ENST00000566195 2125 ntBASIC13.66□□□□□ -0.22
COL10A1Q03692 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC13.66□□□□□ -0.22
COL10A1Q03692 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
COL10A1Q03692 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
COL10A1Q03692 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
COL10A1Q03692 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
COL10A1Q03692 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC13.65□□□□□ -0.22
COL10A1Q03692 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC13.65□□□□□ -0.22
COL10A1Q03692 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
COL10A1Q03692 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC13.65□□□□□ -0.22
COL10A1Q03692 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 68.7 ms