Protein–RNA interactions for Protein: Q01850

CDR2, Cerebellar degeneration-related protein 2, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2Q01850 MIR346-201ENST00000362234 95 ntBASIC17.22■□□□□ 0.35
CDR2Q01850 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC17.22■□□□□ 0.35
CDR2Q01850 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDR2Q01850 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC17.22■□□□□ 0.35
CDR2Q01850 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC17.22■□□□□ 0.35
CDR2Q01850 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC17.22■□□□□ 0.35
CDR2Q01850 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC17.22■□□□□ 0.35
CDR2Q01850 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CDR2Q01850 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CDR2Q01850 AC079140.1-201ENST00000508039 487 ntBASIC17.22■□□□□ 0.35
CDR2Q01850 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC17.22■□□□□ 0.35
CDR2Q01850 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC17.22■□□□□ 0.35
CDR2Q01850 RNF34-208ENST00000555076 593 ntTSL 3 BASIC17.22■□□□□ 0.35
CDR2Q01850 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
CDR2Q01850 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC17.22■□□□□ 0.35
CDR2Q01850 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CDR2Q01850 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CDR2Q01850 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDR2Q01850 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CDR2Q01850 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDR2Q01850 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
CDR2Q01850 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
CDR2Q01850 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC17.22■□□□□ 0.35
CDR2Q01850 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDR2Q01850 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC17.22■□□□□ 0.35
CDR2Q01850 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC17.22■□□□□ 0.35
CDR2Q01850 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDR2Q01850 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDR2Q01850 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CDR2Q01850 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDR2Q01850 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CDR2Q01850 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
CDR2Q01850 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC17.21■□□□□ 0.35
CDR2Q01850 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC17.21■□□□□ 0.35
CDR2Q01850 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
CDR2Q01850 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
CDR2Q01850 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
CDR2Q01850 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC17.21■□□□□ 0.35
CDR2Q01850 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDR2Q01850 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CDR2Q01850 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
CDR2Q01850 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CDR2Q01850 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC17.21■□□□□ 0.35
CDR2Q01850 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDR2Q01850 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC17.21■□□□□ 0.35
CDR2Q01850 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDR2Q01850 CBR1-202ENST00000399191 838 ntTSL 3 BASIC17.21■□□□□ 0.35
CDR2Q01850 PP14571-201ENST00000404327 934 ntTSL 2 BASIC17.21■□□□□ 0.35
CDR2Q01850 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
CDR2Q01850 HTR5BP-201ENST00000430851 1154 ntBASIC17.21■□□□□ 0.35
CDR2Q01850 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC17.21■□□□□ 0.35
CDR2Q01850 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC17.21■□□□□ 0.35
CDR2Q01850 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC17.21■□□□□ 0.35
CDR2Q01850 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC17.21■□□□□ 0.35
CDR2Q01850 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC17.21■□□□□ 0.35
CDR2Q01850 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC17.21■□□□□ 0.35
CDR2Q01850 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC17.21■□□□□ 0.35
CDR2Q01850 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC17.21■□□□□ 0.35
CDR2Q01850 AP000842.3-202ENST00000569238 1080 ntBASIC17.21■□□□□ 0.35
CDR2Q01850 SSH2-211ENST00000590153 570 ntTSL 4 BASIC17.21■□□□□ 0.35
CDR2Q01850 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC17.21■□□□□ 0.35
CDR2Q01850 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC17.21■□□□□ 0.35
CDR2Q01850 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
CDR2Q01850 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CDR2Q01850 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CDR2Q01850 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDR2Q01850 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC17.21■□□□□ 0.35
CDR2Q01850 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC17.21■□□□□ 0.35
CDR2Q01850 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
CDR2Q01850 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CDR2Q01850 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.34
CDR2Q01850 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
CDR2Q01850 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
CDR2Q01850 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDR2Q01850 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDR2Q01850 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDR2Q01850 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDR2Q01850 AC134407.2-201ENST00000625089 1978 ntBASIC17.2■□□□□ 0.34
CDR2Q01850 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
CDR2Q01850 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC17.2■□□□□ 0.34
CDR2Q01850 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
CDR2Q01850 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
CDR2Q01850 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDR2Q01850 ALG1L5P-201ENST00000482043 771 ntBASIC17.2■□□□□ 0.34
CDR2Q01850 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC17.2■□□□□ 0.34
CDR2Q01850 GATB-205ENST00000508611 605 ntTSL 2 BASIC17.2■□□□□ 0.34
CDR2Q01850 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC17.2■□□□□ 0.34
CDR2Q01850 KRT8P23-201ENST00000560090 1207 ntBASIC17.2■□□□□ 0.34
CDR2Q01850 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC17.2■□□□□ 0.34
CDR2Q01850 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC17.2■□□□□ 0.34
CDR2Q01850 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC17.2■□□□□ 0.34
CDR2Q01850 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC17.2■□□□□ 0.34
CDR2Q01850 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CDR2Q01850 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
CDR2Q01850 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
CDR2Q01850 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CDR2Q01850 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CDR2Q01850 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDR2Q01850 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDR2Q01850 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms