Protein–RNA interactions for Protein: P62820

RAB1A, Ras-related protein Rab-1A, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB1AP62820 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB1AP62820 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
RAB1AP62820 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB1AP62820 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
RAB1AP62820 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB1AP62820 HYMAI-201ENST00000635591 3347 ntBASIC14.24□□□□□ -0.13
RAB1AP62820 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB1AP62820 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB1AP62820 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC14.24□□□□□ -0.13
RAB1AP62820 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB1AP62820 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC14.24□□□□□ -0.13
RAB1AP62820 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB1AP62820 FAM58DP-201ENST00000428076 619 ntBASIC14.24□□□□□ -0.13
RAB1AP62820 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC14.24□□□□□ -0.13
RAB1AP62820 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC14.24□□□□□ -0.13
RAB1AP62820 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC14.24□□□□□ -0.13
RAB1AP62820 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB1AP62820 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC14.24□□□□□ -0.13
RAB1AP62820 AL365330.1-201ENST00000607459 531 ntBASIC14.24□□□□□ -0.13
RAB1AP62820 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC14.24□□□□□ -0.13
RAB1AP62820 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC14.24□□□□□ -0.13
RAB1AP62820 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC14.24□□□□□ -0.13
RAB1AP62820 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RAB1AP62820 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC14.24□□□□□ -0.13
RAB1AP62820 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RAB1AP62820 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC14.24□□□□□ -0.13
RAB1AP62820 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB1AP62820 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RAB1AP62820 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RAB1AP62820 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC14.24□□□□□ -0.13
RAB1AP62820 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC14.24□□□□□ -0.13
RAB1AP62820 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB1AP62820 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB1AP62820 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC14.24□□□□□ -0.13
RAB1AP62820 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB1AP62820 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RAB1AP62820 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC14.24□□□□□ -0.13
RAB1AP62820 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB1AP62820 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB1AP62820 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB1AP62820 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RAB1AP62820 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC14.23□□□□□ -0.13
RAB1AP62820 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
RAB1AP62820 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RAB1AP62820 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
RAB1AP62820 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
RAB1AP62820 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
RAB1AP62820 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RAB1AP62820 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC14.23□□□□□ -0.13
RAB1AP62820 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC14.23□□□□□ -0.13
RAB1AP62820 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC14.23□□□□□ -0.13
RAB1AP62820 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB1AP62820 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB1AP62820 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB1AP62820 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB1AP62820 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
RAB1AP62820 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RAB1AP62820 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB1AP62820 RBPMS2P1-201ENST00000437762 623 ntBASIC14.23□□□□□ -0.13
RAB1AP62820 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC14.23□□□□□ -0.13
RAB1AP62820 RNA5SP410-201ENST00000516285 106 ntBASIC14.23□□□□□ -0.13
RAB1AP62820 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC14.23□□□□□ -0.13
RAB1AP62820 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC14.23□□□□□ -0.13
RAB1AP62820 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
RAB1AP62820 AC009093.7-201ENST00000623853 1223 ntBASIC14.23□□□□□ -0.13
RAB1AP62820 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC14.23□□□□□ -0.13
RAB1AP62820 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB1AP62820 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
RAB1AP62820 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC14.23□□□□□ -0.13
RAB1AP62820 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RAB1AP62820 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB1AP62820 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB1AP62820 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB1AP62820 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC14.23□□□□□ -0.13
RAB1AP62820 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB1AP62820 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC14.23□□□□□ -0.13
RAB1AP62820 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC14.23□□□□□ -0.13
RAB1AP62820 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB1AP62820 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
RAB1AP62820 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC14.23□□□□□ -0.13
RAB1AP62820 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RAB1AP62820 AL136379.1-201ENST00000623471 2642 ntBASIC14.23□□□□□ -0.13
RAB1AP62820 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC14.23□□□□□ -0.13
RAB1AP62820 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC14.23□□□□□ -0.13
RAB1AP62820 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB1AP62820 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RAB1AP62820 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC14.23□□□□□ -0.13
RAB1AP62820 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB1AP62820 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
RAB1AP62820 GOLGA6L17P-202ENST00000614358 1398 ntBASIC14.22□□□□□ -0.13
RAB1AP62820 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB1AP62820 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
RAB1AP62820 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC14.22□□□□□ -0.13
RAB1AP62820 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
RAB1AP62820 AP3S2-216ENST00000617003 1561 ntBASIC14.22□□□□□ -0.13
RAB1AP62820 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
RAB1AP62820 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB1AP62820 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB1AP62820 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB1AP62820 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms