Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
VBP1P61758 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC14.53□□□□□ -0.08
VBP1P61758 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
VBP1P61758 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
VBP1P61758 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
VBP1P61758 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
VBP1P61758 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC14.53□□□□□ -0.08
VBP1P61758 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
VBP1P61758 MEG3-211ENST00000452514 461 ntTSL 3 BASIC14.53□□□□□ -0.08
VBP1P61758 SIGLEC30P-201ENST00000455569 941 ntBASIC14.53□□□□□ -0.08
VBP1P61758 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC14.53□□□□□ -0.08
VBP1P61758 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC14.53□□□□□ -0.08
VBP1P61758 CD320-202ENST00000537716 1119 ntTSL 2 BASIC14.53□□□□□ -0.08
VBP1P61758 MIR4651-201ENST00000582622 73 ntBASIC14.53□□□□□ -0.08
VBP1P61758 AL590326.2-201ENST00000625139 305 ntBASIC14.53□□□□□ -0.08
VBP1P61758 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
VBP1P61758 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
VBP1P61758 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
VBP1P61758 AC107918.4-201ENST00000641966 3141 ntBASIC14.53□□□□□ -0.08
VBP1P61758 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
VBP1P61758 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
VBP1P61758 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
VBP1P61758 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC14.53□□□□□ -0.08
VBP1P61758 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
VBP1P61758 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
VBP1P61758 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
VBP1P61758 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
VBP1P61758 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
VBP1P61758 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
VBP1P61758 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
VBP1P61758 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
VBP1P61758 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
VBP1P61758 AC004817.3-201ENST00000602957 2129 ntBASIC14.53□□□□□ -0.08
VBP1P61758 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
VBP1P61758 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
VBP1P61758 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
VBP1P61758 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
VBP1P61758 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
VBP1P61758 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.08
VBP1P61758 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC14.52□□□□□ -0.08
VBP1P61758 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
VBP1P61758 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
VBP1P61758 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC14.52□□□□□ -0.08
VBP1P61758 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
VBP1P61758 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC14.52□□□□□ -0.08
VBP1P61758 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.08
VBP1P61758 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC14.52□□□□□ -0.08
VBP1P61758 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
VBP1P61758 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
VBP1P61758 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
VBP1P61758 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
VBP1P61758 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
VBP1P61758 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
VBP1P61758 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
VBP1P61758 CD9-202ENST00000382515 1229 ntTSL 5 BASIC14.52□□□□□ -0.09
VBP1P61758 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
VBP1P61758 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
VBP1P61758 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC14.52□□□□□ -0.09
VBP1P61758 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
VBP1P61758 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
VBP1P61758 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC14.52□□□□□ -0.09
VBP1P61758 AL359075.1-203ENST00000462729 1002 ntBASIC14.52□□□□□ -0.09
VBP1P61758 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC14.52□□□□□ -0.09
VBP1P61758 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC14.52□□□□□ -0.09
VBP1P61758 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
VBP1P61758 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
VBP1P61758 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC14.52□□□□□ -0.09
VBP1P61758 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC14.52□□□□□ -0.09
VBP1P61758 RNF126P1-202ENST00000569893 925 ntBASIC14.52□□□□□ -0.09
VBP1P61758 MPDU1-223ENST00000582151 728 ntBASIC14.52□□□□□ -0.09
VBP1P61758 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
VBP1P61758 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
VBP1P61758 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
VBP1P61758 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
VBP1P61758 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
VBP1P61758 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
VBP1P61758 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
VBP1P61758 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
VBP1P61758 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC14.52□□□□□ -0.09
VBP1P61758 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
VBP1P61758 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC14.52□□□□□ -0.09
VBP1P61758 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
VBP1P61758 KCP-203ENST00000610776 5108 ntTSL 5 BASIC14.52□□□□□ -0.09
VBP1P61758 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
VBP1P61758 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
VBP1P61758 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.09
VBP1P61758 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
VBP1P61758 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC14.51□□□□□ -0.09
VBP1P61758 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
VBP1P61758 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
VBP1P61758 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
VBP1P61758 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC14.51□□□□□ -0.09
VBP1P61758 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC14.51□□□□□ -0.09
VBP1P61758 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
VBP1P61758 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
VBP1P61758 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
VBP1P61758 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
VBP1P61758 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC14.51□□□□□ -0.09
VBP1P61758 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
VBP1P61758 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms