Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
AP3S2P59780 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
AP3S2P59780 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
AP3S2P59780 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
AP3S2P59780 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC13.92□□□□□ -0.18
AP3S2P59780 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC13.92□□□□□ -0.18
AP3S2P59780 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
AP3S2P59780 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
AP3S2P59780 GCSHP5-201ENST00000443090 522 ntBASIC13.92□□□□□ -0.18
AP3S2P59780 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC13.92□□□□□ -0.18
AP3S2P59780 VENTXP7-201ENST00000475503 772 ntBASIC13.92□□□□□ -0.18
AP3S2P59780 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC13.92□□□□□ -0.18
AP3S2P59780 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC13.92□□□□□ -0.18
AP3S2P59780 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC13.92□□□□□ -0.18
AP3S2P59780 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
AP3S2P59780 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC13.92□□□□□ -0.18
AP3S2P59780 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
AP3S2P59780 WDR6-223ENST00000627177 207 ntTSL 2 BASIC13.92□□□□□ -0.18
AP3S2P59780 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
AP3S2P59780 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
AP3S2P59780 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC13.92□□□□□ -0.18
AP3S2P59780 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
AP3S2P59780 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
AP3S2P59780 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC13.92□□□□□ -0.18
AP3S2P59780 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
AP3S2P59780 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
AP3S2P59780 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
AP3S2P59780 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
AP3S2P59780 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC13.92□□□□□ -0.18
AP3S2P59780 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
AP3S2P59780 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
AP3S2P59780 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC13.92□□□□□ -0.18
AP3S2P59780 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
AP3S2P59780 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
AP3S2P59780 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
AP3S2P59780 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
AP3S2P59780 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
AP3S2P59780 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
AP3S2P59780 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
AP3S2P59780 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
AP3S2P59780 AC004817.3-201ENST00000602957 2129 ntBASIC13.91□□□□□ -0.18
AP3S2P59780 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
AP3S2P59780 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
AP3S2P59780 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC13.91□□□□□ -0.18
AP3S2P59780 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
AP3S2P59780 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
AP3S2P59780 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
AP3S2P59780 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC13.91□□□□□ -0.18
AP3S2P59780 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
AP3S2P59780 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC13.91□□□□□ -0.18
AP3S2P59780 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC13.91□□□□□ -0.18
AP3S2P59780 AC005622.1-201ENST00000636801 1703 ntBASIC13.91□□□□□ -0.18
AP3S2P59780 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC13.91□□□□□ -0.18
AP3S2P59780 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
AP3S2P59780 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
AP3S2P59780 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC13.91□□□□□ -0.18
AP3S2P59780 SPDYE21P-201ENST00000413323 827 ntBASIC13.91□□□□□ -0.18
AP3S2P59780 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC13.91□□□□□ -0.18
AP3S2P59780 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC13.91□□□□□ -0.18
AP3S2P59780 AC090616.6-201ENST00000582640 721 ntBASIC13.91□□□□□ -0.18
AP3S2P59780 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC13.91□□□□□ -0.18
AP3S2P59780 RPS15-207ENST00000591032 550 ntTSL 3 BASIC13.91□□□□□ -0.18
AP3S2P59780 RPS15-212ENST00000593052 629 ntTSL 2 BASIC13.91□□□□□ -0.18
AP3S2P59780 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
AP3S2P59780 AP001350.2-201ENST00000625104 1094 ntBASIC13.91□□□□□ -0.18
AP3S2P59780 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC13.91□□□□□ -0.18
AP3S2P59780 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC13.91□□□□□ -0.18
AP3S2P59780 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC13.91□□□□□ -0.18
AP3S2P59780 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
AP3S2P59780 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC13.91□□□□□ -0.18
AP3S2P59780 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
AP3S2P59780 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC13.91□□□□□ -0.18
AP3S2P59780 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
AP3S2P59780 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC13.91□□□□□ -0.18
AP3S2P59780 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
AP3S2P59780 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
AP3S2P59780 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
AP3S2P59780 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
AP3S2P59780 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
AP3S2P59780 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
AP3S2P59780 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
AP3S2P59780 TET3-201ENST00000305799 5174 ntTSL 5 BASIC13.91□□□□□ -0.18
AP3S2P59780 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
AP3S2P59780 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC13.91□□□□□ -0.18
AP3S2P59780 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC13.91□□□□□ -0.18
AP3S2P59780 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
AP3S2P59780 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
AP3S2P59780 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
AP3S2P59780 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
AP3S2P59780 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
AP3S2P59780 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
AP3S2P59780 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
AP3S2P59780 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC13.91□□□□□ -0.18
AP3S2P59780 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
AP3S2P59780 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
AP3S2P59780 AL590787.1-201ENST00000568856 1315 ntBASIC13.9□□□□□ -0.18
AP3S2P59780 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
AP3S2P59780 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
AP3S2P59780 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
AP3S2P59780 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms