Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC14.58□□□□□ -0.08
SUMO3P55854 GPER1-207ENST00000619052 571 ntTSL 2 BASIC14.58□□□□□ -0.08
SUMO3P55854 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC14.58□□□□□ -0.08
SUMO3P55854 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SUMO3P55854 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SUMO3P55854 TUBB3P1-201ENST00000405796 1332 ntBASIC14.58□□□□□ -0.08
SUMO3P55854 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SUMO3P55854 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
SUMO3P55854 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC14.58□□□□□ -0.08
SUMO3P55854 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC14.58□□□□□ -0.08
SUMO3P55854 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
SUMO3P55854 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
SUMO3P55854 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
SUMO3P55854 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
SUMO3P55854 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
SUMO3P55854 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SUMO3P55854 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC14.58□□□□□ -0.08
SUMO3P55854 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SUMO3P55854 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC14.58□□□□□ -0.08
SUMO3P55854 KRT8P12-202ENST00000472924 1397 ntBASIC14.58□□□□□ -0.08
SUMO3P55854 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SUMO3P55854 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC14.58□□□□□ -0.08
SUMO3P55854 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SUMO3P55854 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SUMO3P55854 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SUMO3P55854 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SUMO3P55854 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC14.57□□□□□ -0.08
SUMO3P55854 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SUMO3P55854 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC14.57□□□□□ -0.08
SUMO3P55854 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
SUMO3P55854 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SUMO3P55854 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SUMO3P55854 REXO1L1P-202ENST00000608646 1974 ntBASIC14.57□□□□□ -0.08
SUMO3P55854 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC14.57□□□□□ -0.08
SUMO3P55854 LBH-203ENST00000404397 543 ntTSL 4 BASIC14.57□□□□□ -0.08
SUMO3P55854 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC14.57□□□□□ -0.08
SUMO3P55854 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
SUMO3P55854 ELP6-209ENST00000446787 894 ntTSL 3 BASIC14.57□□□□□ -0.08
SUMO3P55854 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SUMO3P55854 SERBP1P3-201ENST00000459980 809 ntBASIC14.57□□□□□ -0.08
SUMO3P55854 SUOX-214ENST00000551841 906 ntTSL 3 BASIC14.57□□□□□ -0.08
SUMO3P55854 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC14.57□□□□□ -0.08
SUMO3P55854 AC140878.1-201ENST00000565277 250 ntBASIC14.57□□□□□ -0.08
SUMO3P55854 AC051619.7-201ENST00000568314 623 ntBASIC14.57□□□□□ -0.08
SUMO3P55854 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC14.57□□□□□ -0.08
SUMO3P55854 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
SUMO3P55854 AC093028.1-201ENST00000622998 982 ntBASIC14.57□□□□□ -0.08
SUMO3P55854 SUPT20HL2-201ENST00000486479 2409 ntBASIC14.57□□□□□ -0.08
SUMO3P55854 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC14.57□□□□□ -0.08
SUMO3P55854 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SUMO3P55854 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
SUMO3P55854 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
SUMO3P55854 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SUMO3P55854 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
SUMO3P55854 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
SUMO3P55854 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SUMO3P55854 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SUMO3P55854 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SUMO3P55854 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SUMO3P55854 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SUMO3P55854 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
SUMO3P55854 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SUMO3P55854 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC14.57□□□□□ -0.08
SUMO3P55854 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC14.56□□□□□ -0.08
SUMO3P55854 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC14.56□□□□□ -0.08
SUMO3P55854 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SUMO3P55854 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
SUMO3P55854 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
SUMO3P55854 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
SUMO3P55854 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SUMO3P55854 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SUMO3P55854 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
SUMO3P55854 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
SUMO3P55854 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC14.56□□□□□ -0.08
SUMO3P55854 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
SUMO3P55854 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SUMO3P55854 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC14.56□□□□□ -0.08
SUMO3P55854 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
SUMO3P55854 BAD-202ENST00000394531 631 ntTSL 3 BASIC14.56□□□□□ -0.08
SUMO3P55854 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SUMO3P55854 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
SUMO3P55854 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SUMO3P55854 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
SUMO3P55854 AC107890.1-201ENST00000422478 521 ntBASIC14.56□□□□□ -0.08
SUMO3P55854 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
SUMO3P55854 PPP6R2P1-201ENST00000450880 1275 ntBASIC14.56□□□□□ -0.08
SUMO3P55854 SATB1-217ENST00000493952 626 ntTSL 3 BASIC14.56□□□□□ -0.08
SUMO3P55854 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC14.56□□□□□ -0.08
SUMO3P55854 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SUMO3P55854 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC14.56□□□□□ -0.08
SUMO3P55854 BAD-207ENST00000544785 525 ntTSL 3 BASIC14.56□□□□□ -0.08
SUMO3P55854 AL079307.3-201ENST00000556114 283 ntBASIC14.56□□□□□ -0.08
SUMO3P55854 AL450472.2-201ENST00000603663 1156 ntBASIC14.56□□□□□ -0.08
SUMO3P55854 AL589739.1-201ENST00000607720 493 ntBASIC14.56□□□□□ -0.08
SUMO3P55854 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC14.56□□□□□ -0.08
SUMO3P55854 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SUMO3P55854 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC14.56□□□□□ -0.08
SUMO3P55854 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC14.56□□□□□ -0.08
SUMO3P55854 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
SUMO3P55854 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms