Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
APOC4P55056 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
APOC4P55056 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC11.81□□□□□ -0.52
APOC4P55056 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
APOC4P55056 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
APOC4P55056 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
APOC4P55056 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
APOC4P55056 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
APOC4P55056 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
APOC4P55056 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
APOC4P55056 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC11.81□□□□□ -0.52
APOC4P55056 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC11.81□□□□□ -0.52
APOC4P55056 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
APOC4P55056 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC11.81□□□□□ -0.52
APOC4P55056 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC11.81□□□□□ -0.52
APOC4P55056 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
APOC4P55056 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
APOC4P55056 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
APOC4P55056 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
APOC4P55056 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
APOC4P55056 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC11.8□□□□□ -0.52
APOC4P55056 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
APOC4P55056 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
APOC4P55056 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
APOC4P55056 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
APOC4P55056 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC11.8□□□□□ -0.52
APOC4P55056 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
APOC4P55056 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
APOC4P55056 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC11.8□□□□□ -0.52
APOC4P55056 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
APOC4P55056 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
APOC4P55056 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC11.8□□□□□ -0.52
APOC4P55056 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
APOC4P55056 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
APOC4P55056 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
APOC4P55056 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC11.8□□□□□ -0.52
APOC4P55056 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
APOC4P55056 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC11.8□□□□□ -0.52
APOC4P55056 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
APOC4P55056 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
APOC4P55056 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
APOC4P55056 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
APOC4P55056 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
APOC4P55056 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
APOC4P55056 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
APOC4P55056 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
APOC4P55056 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
APOC4P55056 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
APOC4P55056 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
APOC4P55056 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
APOC4P55056 CALY-203ENST00000368558 825 ntTSL 5 BASIC11.8□□□□□ -0.52
APOC4P55056 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
APOC4P55056 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
APOC4P55056 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC11.8□□□□□ -0.52
APOC4P55056 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC11.8□□□□□ -0.52
APOC4P55056 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC11.8□□□□□ -0.52
APOC4P55056 ELP6-209ENST00000446787 894 ntTSL 3 BASIC11.8□□□□□ -0.52
APOC4P55056 COX20P2-201ENST00000452636 358 ntBASIC11.8□□□□□ -0.52
APOC4P55056 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC11.8□□□□□ -0.52
APOC4P55056 FXR1-221ENST00000491674 365 ntTSL 2 BASIC11.8□□□□□ -0.52
APOC4P55056 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC11.8□□□□□ -0.52
APOC4P55056 CCDC74BP1-201ENST00000508880 1123 ntBASIC11.8□□□□□ -0.52
APOC4P55056 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
APOC4P55056 SDHAP3-202ENST00000515467 728 ntBASIC11.8□□□□□ -0.52
APOC4P55056 REEP4-207ENST00000523293 913 ntTSL 3 BASIC11.8□□□□□ -0.52
APOC4P55056 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC11.8□□□□□ -0.52
APOC4P55056 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
APOC4P55056 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
APOC4P55056 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC11.8□□□□□ -0.52
APOC4P55056 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC11.8□□□□□ -0.52
APOC4P55056 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC11.8□□□□□ -0.52
APOC4P55056 AL358472.5-202ENST00000641448 1267 ntBASIC11.8□□□□□ -0.52
APOC4P55056 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
APOC4P55056 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC11.8□□□□□ -0.52
APOC4P55056 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC11.8□□□□□ -0.52
APOC4P55056 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
APOC4P55056 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
APOC4P55056 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
APOC4P55056 AD000864.1-201ENST00000624076 2295 ntBASIC11.8□□□□□ -0.52
APOC4P55056 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
APOC4P55056 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
APOC4P55056 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
APOC4P55056 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
APOC4P55056 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC11.8□□□□□ -0.52
APOC4P55056 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC11.8□□□□□ -0.52
APOC4P55056 ME2P1-201ENST00000426028 1970 ntBASIC11.79□□□□□ -0.52
APOC4P55056 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC11.79□□□□□ -0.52
APOC4P55056 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
APOC4P55056 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC11.79□□□□□ -0.52
APOC4P55056 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC11.79□□□□□ -0.52
APOC4P55056 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC11.79□□□□□ -0.52
APOC4P55056 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
APOC4P55056 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
APOC4P55056 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC11.79□□□□□ -0.52
APOC4P55056 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
APOC4P55056 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC11.79□□□□□ -0.52
APOC4P55056 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
APOC4P55056 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
APOC4P55056 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC11.79□□□□□ -0.52
APOC4P55056 ING5-213ENST00000636051 4199 ntTSL 5 BASIC11.79□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms