Protein–RNA interactions for Protein: P54289

CACNA2D1, Voltage-dependent calcium channel subunit alpha-2/delta-1, humanhuman

Predictions only

Length 1,103 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D1P54289 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CACNA2D1P54289 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CACNA2D1P54289 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CACNA2D1P54289 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CACNA2D1P54289 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CACNA2D1P54289 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC17.11■□□□□ 0.33
CACNA2D1P54289 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC17.11■□□□□ 0.33
CACNA2D1P54289 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC17.11■□□□□ 0.33
CACNA2D1P54289 AL136379.1-201ENST00000623471 2642 ntBASIC17.11■□□□□ 0.33
CACNA2D1P54289 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
CACNA2D1P54289 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC17.11■□□□□ 0.33
CACNA2D1P54289 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC17.11■□□□□ 0.33
CACNA2D1P54289 AL136982.4-201ENST00000437689 1740 ntBASIC17.11■□□□□ 0.33
CACNA2D1P54289 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CACNA2D1P54289 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CACNA2D1P54289 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CACNA2D1P54289 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CACNA2D1P54289 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
CACNA2D1P54289 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CACNA2D1P54289 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CACNA2D1P54289 AL080243.2-201ENST00000418783 582 ntBASIC17.11■□□□□ 0.33
CACNA2D1P54289 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC17.11■□□□□ 0.33
CACNA2D1P54289 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CACNA2D1P54289 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC17.11■□□□□ 0.33
CACNA2D1P54289 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC17.11■□□□□ 0.33
CACNA2D1P54289 AL589739.1-201ENST00000607720 493 ntBASIC17.11■□□□□ 0.33
CACNA2D1P54289 TEX28P1-201ENST00000613479 1221 ntBASIC17.11■□□□□ 0.33
CACNA2D1P54289 TEX28P2-201ENST00000617764 1221 ntBASIC17.11■□□□□ 0.33
CACNA2D1P54289 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CACNA2D1P54289 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CACNA2D1P54289 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CACNA2D1P54289 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CACNA2D1P54289 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CACNA2D1P54289 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC17.11■□□□□ 0.33
CACNA2D1P54289 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CACNA2D1P54289 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CACNA2D1P54289 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CACNA2D1P54289 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC17.11■□□□□ 0.33
CACNA2D1P54289 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CACNA2D1P54289 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CACNA2D1P54289 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CACNA2D1P54289 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC17.1■□□□□ 0.33
CACNA2D1P54289 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CACNA2D1P54289 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CACNA2D1P54289 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CACNA2D1P54289 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
CACNA2D1P54289 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
CACNA2D1P54289 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC17.1■□□□□ 0.33
CACNA2D1P54289 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CACNA2D1P54289 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
CACNA2D1P54289 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
CACNA2D1P54289 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CACNA2D1P54289 VMA21-202ENST00000370361 693 ntTSL 5 BASIC17.1■□□□□ 0.33
CACNA2D1P54289 MRPS18AP1-201ENST00000414458 589 ntBASIC17.1■□□□□ 0.33
CACNA2D1P54289 FAM8A3P-201ENST00000427218 844 ntBASIC17.1■□□□□ 0.33
CACNA2D1P54289 BASP1P1-201ENST00000430708 665 ntBASIC17.1■□□□□ 0.33
CACNA2D1P54289 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC17.1■□□□□ 0.33
CACNA2D1P54289 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC17.1■□□□□ 0.33
CACNA2D1P54289 HLA-V-204ENST00000476601 1289 ntBASIC17.1■□□□□ 0.33
CACNA2D1P54289 AC004890.2-204ENST00000481968 304 ntBASIC17.1■□□□□ 0.33
CACNA2D1P54289 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CACNA2D1P54289 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC17.1■□□□□ 0.33
CACNA2D1P54289 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC17.1■□□□□ 0.33
CACNA2D1P54289 AL079307.3-201ENST00000556114 283 ntBASIC17.1■□□□□ 0.33
CACNA2D1P54289 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC17.1■□□□□ 0.33
CACNA2D1P54289 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
CACNA2D1P54289 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CACNA2D1P54289 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC17.1■□□□□ 0.33
CACNA2D1P54289 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CACNA2D1P54289 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC17.1■□□□□ 0.33
CACNA2D1P54289 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC17.1■□□□□ 0.33
CACNA2D1P54289 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CACNA2D1P54289 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CACNA2D1P54289 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC17.1■□□□□ 0.33
CACNA2D1P54289 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CACNA2D1P54289 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
CACNA2D1P54289 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CACNA2D1P54289 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC17.1■□□□□ 0.33
CACNA2D1P54289 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CACNA2D1P54289 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CACNA2D1P54289 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC17.09■□□□□ 0.33
CACNA2D1P54289 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CACNA2D1P54289 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC17.09■□□□□ 0.33
CACNA2D1P54289 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CACNA2D1P54289 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CACNA2D1P54289 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CACNA2D1P54289 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CACNA2D1P54289 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CACNA2D1P54289 AC241585.1-201ENST00000433527 519 ntBASIC17.09■□□□□ 0.33
CACNA2D1P54289 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
CACNA2D1P54289 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CACNA2D1P54289 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC17.09■□□□□ 0.33
CACNA2D1P54289 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CACNA2D1P54289 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC17.09■□□□□ 0.33
CACNA2D1P54289 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC17.09■□□□□ 0.33
CACNA2D1P54289 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CACNA2D1P54289 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CACNA2D1P54289 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CACNA2D1P54289 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC17.09■□□□□ 0.33
CACNA2D1P54289 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms