Protein–RNA interactions for Protein: P53708

ITGA8, Integrin alpha-8, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA8P53708 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
ITGA8P53708 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
ITGA8P53708 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ITGA8P53708 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
ITGA8P53708 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
ITGA8P53708 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC16.59■□□□□ 0.25
ITGA8P53708 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ITGA8P53708 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ITGA8P53708 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ITGA8P53708 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC16.59■□□□□ 0.25
ITGA8P53708 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ITGA8P53708 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ITGA8P53708 ATP6V0CP3-201ENST00000417255 467 ntBASIC16.59■□□□□ 0.25
ITGA8P53708 PRSS29P-201ENST00000440800 595 ntBASIC16.59■□□□□ 0.25
ITGA8P53708 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
ITGA8P53708 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ITGA8P53708 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC16.59■□□□□ 0.25
ITGA8P53708 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
ITGA8P53708 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC16.59■□□□□ 0.25
ITGA8P53708 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC16.59■□□□□ 0.25
ITGA8P53708 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC16.59■□□□□ 0.25
ITGA8P53708 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC16.59■□□□□ 0.25
ITGA8P53708 AL365330.1-201ENST00000607459 531 ntBASIC16.59■□□□□ 0.25
ITGA8P53708 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC16.59■□□□□ 0.25
ITGA8P53708 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
ITGA8P53708 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ITGA8P53708 AC063926.3-201ENST00000624734 5658 ntBASIC16.59■□□□□ 0.25
ITGA8P53708 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC16.59■□□□□ 0.25
ITGA8P53708 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC16.59■□□□□ 0.25
ITGA8P53708 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC16.59■□□□□ 0.25
ITGA8P53708 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
ITGA8P53708 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC16.59■□□□□ 0.25
ITGA8P53708 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC16.59■□□□□ 0.25
ITGA8P53708 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ITGA8P53708 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ITGA8P53708 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ITGA8P53708 AL136379.1-201ENST00000623471 2642 ntBASIC16.59■□□□□ 0.25
ITGA8P53708 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ITGA8P53708 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC16.59■□□□□ 0.25
ITGA8P53708 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ITGA8P53708 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC16.59■□□□□ 0.25
ITGA8P53708 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ITGA8P53708 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
ITGA8P53708 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
ITGA8P53708 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
ITGA8P53708 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC16.58■□□□□ 0.25
ITGA8P53708 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
ITGA8P53708 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
ITGA8P53708 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
ITGA8P53708 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
ITGA8P53708 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
ITGA8P53708 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
ITGA8P53708 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC16.58■□□□□ 0.24
ITGA8P53708 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ITGA8P53708 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC16.58■□□□□ 0.24
ITGA8P53708 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC16.58■□□□□ 0.24
ITGA8P53708 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC16.58■□□□□ 0.24
ITGA8P53708 AC148477.8-201ENST00000624298 468 ntBASIC16.58■□□□□ 0.24
ITGA8P53708 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC16.58■□□□□ 0.24
ITGA8P53708 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
ITGA8P53708 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC16.58■□□□□ 0.24
ITGA8P53708 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.24
ITGA8P53708 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
ITGA8P53708 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
ITGA8P53708 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ITGA8P53708 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
ITGA8P53708 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
ITGA8P53708 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ITGA8P53708 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC16.58■□□□□ 0.24
ITGA8P53708 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
ITGA8P53708 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
ITGA8P53708 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ITGA8P53708 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.24
ITGA8P53708 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC16.58■□□□□ 0.24
ITGA8P53708 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ITGA8P53708 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
ITGA8P53708 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
ITGA8P53708 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
ITGA8P53708 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ITGA8P53708 TPO-203ENST00000346956 2923 ntTSL 5 BASIC16.57■□□□□ 0.24
ITGA8P53708 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
ITGA8P53708 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC16.57■□□□□ 0.24
ITGA8P53708 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
ITGA8P53708 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC16.57■□□□□ 0.24
ITGA8P53708 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
ITGA8P53708 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC16.57■□□□□ 0.24
ITGA8P53708 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
ITGA8P53708 AC090616.6-203ENST00000579186 1945 ntBASIC16.57■□□□□ 0.24
ITGA8P53708 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
ITGA8P53708 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC16.57■□□□□ 0.24
ITGA8P53708 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC16.57■□□□□ 0.24
ITGA8P53708 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ITGA8P53708 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ITGA8P53708 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
ITGA8P53708 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ITGA8P53708 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
ITGA8P53708 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
ITGA8P53708 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC16.57■□□□□ 0.24
ITGA8P53708 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC16.57■□□□□ 0.24
ITGA8P53708 DDT-204ENST00000404092 805 ntTSL 3 BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms