Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SMSP52788 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC15.19■□□□□ 0.02
SMSP52788 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SMSP52788 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
SMSP52788 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
SMSP52788 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
SMSP52788 AC023824.1-201ENST00000562945 2975 ntBASIC15.19■□□□□ 0.02
SMSP52788 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SMSP52788 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC15.19■□□□□ 0.02
SMSP52788 VILL-207ENST00000465644 1857 ntTSL 5 BASIC15.19■□□□□ 0.02
SMSP52788 AL671710.1-201ENST00000610245 2349 ntBASIC15.19■□□□□ 0.02
SMSP52788 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
SMSP52788 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SMSP52788 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
SMSP52788 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC15.19■□□□□ 0.02
SMSP52788 RN7SL589P-201ENST00000481268 310 ntBASIC15.19■□□□□ 0.02
SMSP52788 INGX-202ENST00000489074 768 ntBASIC15.19■□□□□ 0.02
SMSP52788 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC15.19■□□□□ 0.02
SMSP52788 AC093214.1-201ENST00000511688 1107 ntBASIC15.19■□□□□ 0.02
SMSP52788 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC15.19■□□□□ 0.02
SMSP52788 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
SMSP52788 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC15.19■□□□□ 0.02
SMSP52788 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC15.19■□□□□ 0.02
SMSP52788 AC138761.1-201ENST00000584393 385 ntBASIC15.19■□□□□ 0.02
SMSP52788 INO80C-206ENST00000586489 594 ntTSL 3 BASIC15.19■□□□□ 0.02
SMSP52788 AC005498.2-205ENST00000593218 784 ntBASIC15.19■□□□□ 0.02
SMSP52788 AJ011932.1-201ENST00000621707 465 ntBASIC15.19■□□□□ 0.02
SMSP52788 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
SMSP52788 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SMSP52788 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC15.19■□□□□ 0.02
SMSP52788 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SMSP52788 SP100-205ENST00000409824 1802 ntTSL 5 BASIC15.19■□□□□ 0.02
SMSP52788 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC15.19■□□□□ 0.02
SMSP52788 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
SMSP52788 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SMSP52788 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SMSP52788 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
SMSP52788 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
SMSP52788 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC15.19■□□□□ 0.02
SMSP52788 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
SMSP52788 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SMSP52788 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SMSP52788 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SMSP52788 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SMSP52788 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SMSP52788 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
SMSP52788 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC15.19■□□□□ 0.02
SMSP52788 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SMSP52788 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SMSP52788 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SMSP52788 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SMSP52788 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SMSP52788 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC15.18■□□□□ 0.02
SMSP52788 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SMSP52788 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
SMSP52788 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
SMSP52788 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC15.18■□□□□ 0.02
SMSP52788 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
SMSP52788 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SMSP52788 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
SMSP52788 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SMSP52788 BASP1P1-201ENST00000430708 665 ntBASIC15.18■□□□□ 0.02
SMSP52788 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SMSP52788 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC15.18■□□□□ 0.02
SMSP52788 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC15.18■□□□□ 0.02
SMSP52788 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC15.18■□□□□ 0.02
SMSP52788 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SMSP52788 ACTL9-202ENST00000612068 1252 ntBASIC15.18■□□□□ 0.02
SMSP52788 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SMSP52788 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC15.18■□□□□ 0.02
SMSP52788 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SMSP52788 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SMSP52788 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SMSP52788 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SMSP52788 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
SMSP52788 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SMSP52788 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
SMSP52788 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
SMSP52788 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SMSP52788 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SMSP52788 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SMSP52788 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC15.18■□□□□ 0.02
SMSP52788 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SMSP52788 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SMSP52788 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC15.18■□□□□ 0.02
SMSP52788 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC15.18■□□□□ 0.02
SMSP52788 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC15.18■□□□□ 0.02
SMSP52788 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SMSP52788 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SMSP52788 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SMSP52788 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SMSP52788 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC15.17■□□□□ 0.02
SMSP52788 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SMSP52788 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC15.17■□□□□ 0.02
SMSP52788 AC092919.2-201ENST00000623631 1645 ntBASIC15.17■□□□□ 0.02
SMSP52788 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
SMSP52788 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC15.17■□□□□ 0.02
SMSP52788 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
SMSP52788 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SMSP52788 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms