Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
GTF2A1P52655 JADE1-209ENST00000511647 3560 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
GTF2A1P52655 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC15.89■□□□□ 0.13
GTF2A1P52655 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC15.89■□□□□ 0.13
GTF2A1P52655 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC15.89■□□□□ 0.13
GTF2A1P52655 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC15.89■□□□□ 0.13
GTF2A1P52655 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
GTF2A1P52655 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
GTF2A1P52655 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
GTF2A1P52655 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
GTF2A1P52655 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC15.89■□□□□ 0.13
GTF2A1P52655 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
GTF2A1P52655 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
GTF2A1P52655 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
GTF2A1P52655 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
GTF2A1P52655 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC15.89■□□□□ 0.13
GTF2A1P52655 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC15.88■□□□□ 0.13
GTF2A1P52655 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
GTF2A1P52655 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
GTF2A1P52655 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
GTF2A1P52655 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
GTF2A1P52655 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
GTF2A1P52655 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC15.88■□□□□ 0.13
GTF2A1P52655 GGT4P-201ENST00000623672 1708 ntBASIC15.88■□□□□ 0.13
GTF2A1P52655 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
GTF2A1P52655 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
GTF2A1P52655 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
GTF2A1P52655 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
GTF2A1P52655 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
GTF2A1P52655 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
GTF2A1P52655 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
GTF2A1P52655 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
GTF2A1P52655 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC15.88■□□□□ 0.13
GTF2A1P52655 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC15.88■□□□□ 0.13
GTF2A1P52655 KRT8P7-201ENST00000533003 1432 ntBASIC15.88■□□□□ 0.13
GTF2A1P52655 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
GTF2A1P52655 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
GTF2A1P52655 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
GTF2A1P52655 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC15.88■□□□□ 0.13
GTF2A1P52655 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
GTF2A1P52655 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
GTF2A1P52655 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC15.88■□□□□ 0.13
GTF2A1P52655 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC15.88■□□□□ 0.13
GTF2A1P52655 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
GTF2A1P52655 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC15.88■□□□□ 0.13
GTF2A1P52655 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC15.88■□□□□ 0.13
GTF2A1P52655 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC15.88■□□□□ 0.13
GTF2A1P52655 CYGB-204ENST00000589342 815 ntTSL 3 BASIC15.88■□□□□ 0.13
GTF2A1P52655 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
GTF2A1P52655 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
GTF2A1P52655 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
GTF2A1P52655 SLC5A9-210ENST00000533824 2219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
GTF2A1P52655 TMEM260-201ENST00000261556 4264 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
GTF2A1P52655 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
GTF2A1P52655 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC15.88■□□□□ 0.13
GTF2A1P52655 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
GTF2A1P52655 GNAL-203ENST00000423027 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
GTF2A1P52655 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
GTF2A1P52655 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC15.88■□□□□ 0.13
GTF2A1P52655 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC15.88■□□□□ 0.13
GTF2A1P52655 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
GTF2A1P52655 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
GTF2A1P52655 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
GTF2A1P52655 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC15.88■□□□□ 0.13
GTF2A1P52655 PARN-202ENST00000420015 2360 ntTSL 2 BASIC15.87■□□□□ 0.13
GTF2A1P52655 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
GTF2A1P52655 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC15.87■□□□□ 0.13
GTF2A1P52655 TNN-202ENST00000621086 4234 ntTSL 5 BASIC15.87■□□□□ 0.13
GTF2A1P52655 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
GTF2A1P52655 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
GTF2A1P52655 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
GTF2A1P52655 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC15.87■□□□□ 0.13
GTF2A1P52655 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
GTF2A1P52655 HSD17B4-201ENST00000256216 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
GTF2A1P52655 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
GTF2A1P52655 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC15.87■□□□□ 0.13
GTF2A1P52655 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
GTF2A1P52655 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
GTF2A1P52655 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
GTF2A1P52655 PLD1-201ENST00000331659 2906 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
GTF2A1P52655 ZCCHC18-206ENST00000611638 2941 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
GTF2A1P52655 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
GTF2A1P52655 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
GTF2A1P52655 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
GTF2A1P52655 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
GTF2A1P52655 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC15.87■□□□□ 0.13
GTF2A1P52655 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC15.87■□□□□ 0.13
GTF2A1P52655 CRYGFP-201ENST00000418459 633 ntBASIC15.87■□□□□ 0.13
GTF2A1P52655 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
GTF2A1P52655 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC15.87■□□□□ 0.13
GTF2A1P52655 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC15.87■□□□□ 0.13
GTF2A1P52655 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
GTF2A1P52655 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC15.87■□□□□ 0.13
GTF2A1P52655 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
GTF2A1P52655 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC15.87■□□□□ 0.13
GTF2A1P52655 CD22-209ENST00000594250 2107 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
GTF2A1P52655 CR769767.2-201ENST00000622735 460 ntBASIC15.87■□□□□ 0.13
GTF2A1P52655 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
GTF2A1P52655 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
GTF2A1P52655 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms