Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CDC34P49427 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC12.81□□□□□ -0.36
CDC34P49427 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CDC34P49427 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
CDC34P49427 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CDC34P49427 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC12.81□□□□□ -0.36
CDC34P49427 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CDC34P49427 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC12.81□□□□□ -0.36
CDC34P49427 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC12.81□□□□□ -0.36
CDC34P49427 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
CDC34P49427 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CDC34P49427 FUOM-202ENST00000368551 628 ntTSL 3 BASIC12.81□□□□□ -0.36
CDC34P49427 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC12.81□□□□□ -0.36
CDC34P49427 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC12.81□□□□□ -0.36
CDC34P49427 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CDC34P49427 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
CDC34P49427 LINC00926-202ENST00000502027 2141 ntTSL 2 BASIC12.81□□□□□ -0.36
CDC34P49427 AC096582.2-201ENST00000510860 516 ntBASIC12.81□□□□□ -0.36
CDC34P49427 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC12.81□□□□□ -0.36
CDC34P49427 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
CDC34P49427 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC12.81□□□□□ -0.36
CDC34P49427 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC12.81□□□□□ -0.36
CDC34P49427 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC12.81□□□□□ -0.36
CDC34P49427 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
CDC34P49427 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CDC34P49427 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC12.81□□□□□ -0.36
CDC34P49427 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC12.81□□□□□ -0.36
CDC34P49427 CYB561-217ENST00000582997 877 ntTSL 5 BASIC12.81□□□□□ -0.36
CDC34P49427 AC010331.1-201ENST00000611423 582 ntBASIC12.81□□□□□ -0.36
CDC34P49427 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC12.81□□□□□ -0.36
CDC34P49427 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC12.81□□□□□ -0.36
CDC34P49427 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CDC34P49427 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC12.81□□□□□ -0.36
CDC34P49427 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CDC34P49427 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC12.81□□□□□ -0.36
CDC34P49427 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CDC34P49427 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
CDC34P49427 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CDC34P49427 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
CDC34P49427 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CDC34P49427 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
CDC34P49427 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
CDC34P49427 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC12.81□□□□□ -0.36
CDC34P49427 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
CDC34P49427 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
CDC34P49427 POR-201ENST00000394893 2532 ntTSL 5 BASIC12.81□□□□□ -0.36
CDC34P49427 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CDC34P49427 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CDC34P49427 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
CDC34P49427 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CDC34P49427 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
CDC34P49427 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC12.8□□□□□ -0.36
CDC34P49427 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC12.8□□□□□ -0.36
CDC34P49427 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CDC34P49427 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC12.8□□□□□ -0.36
CDC34P49427 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CDC34P49427 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CDC34P49427 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CDC34P49427 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
CDC34P49427 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CDC34P49427 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CDC34P49427 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CDC34P49427 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CDC34P49427 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC12.8□□□□□ -0.36
CDC34P49427 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC12.8□□□□□ -0.36
CDC34P49427 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
CDC34P49427 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
CDC34P49427 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CDC34P49427 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CDC34P49427 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC12.8□□□□□ -0.36
CDC34P49427 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CDC34P49427 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CDC34P49427 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC12.8□□□□□ -0.36
CDC34P49427 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC12.8□□□□□ -0.36
CDC34P49427 CDK2AP2P3-201ENST00000422476 372 ntBASIC12.8□□□□□ -0.36
CDC34P49427 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
CDC34P49427 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC12.8□□□□□ -0.36
CDC34P49427 KRT8P26-201ENST00000534154 1276 ntBASIC12.8□□□□□ -0.36
CDC34P49427 LINC01238-205ENST00000567549 1107 ntBASIC12.8□□□□□ -0.36
CDC34P49427 RPS15-207ENST00000591032 550 ntTSL 3 BASIC12.8□□□□□ -0.36
CDC34P49427 RPS15-212ENST00000593052 629 ntTSL 2 BASIC12.8□□□□□ -0.36
CDC34P49427 AP001350.2-201ENST00000625104 1094 ntBASIC12.8□□□□□ -0.36
CDC34P49427 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CDC34P49427 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CDC34P49427 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CDC34P49427 CCBE1-201ENST00000398179 5979 ntTSL 5 BASIC12.8□□□□□ -0.36
CDC34P49427 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CDC34P49427 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC12.8□□□□□ -0.36
CDC34P49427 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
CDC34P49427 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CDC34P49427 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC12.8□□□□□ -0.36
CDC34P49427 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CDC34P49427 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
CDC34P49427 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
CDC34P49427 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CDC34P49427 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CDC34P49427 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CDC34P49427 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CDC34P49427 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CDC34P49427 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms