Protein–RNA interactions for Protein: P48169

GABRA4, Gamma-aminobutyric acid receptor subunit alpha-4, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA4P48169 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
GABRA4P48169 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
GABRA4P48169 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
GABRA4P48169 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC15.22■□□□□ 0.03
GABRA4P48169 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
GABRA4P48169 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
GABRA4P48169 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC15.22■□□□□ 0.03
GABRA4P48169 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
GABRA4P48169 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC15.22■□□□□ 0.03
GABRA4P48169 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
GABRA4P48169 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
GABRA4P48169 AC074338.1-201ENST00000416825 156 ntBASIC15.22■□□□□ 0.03
GABRA4P48169 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC15.22■□□□□ 0.03
GABRA4P48169 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC15.22■□□□□ 0.03
GABRA4P48169 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC15.22■□□□□ 0.03
GABRA4P48169 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC15.22■□□□□ 0.03
GABRA4P48169 FTH1-202ENST00000526640 786 ntTSL 2 BASIC15.22■□□□□ 0.03
GABRA4P48169 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC15.22■□□□□ 0.03
GABRA4P48169 API5-211ENST00000534695 560 ntTSL 5 BASIC15.22■□□□□ 0.03
GABRA4P48169 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
GABRA4P48169 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC15.22■□□□□ 0.03
GABRA4P48169 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC15.22■□□□□ 0.03
GABRA4P48169 COX11-202ENST00000571584 1108 ntTSL 2 BASIC15.22■□□□□ 0.03
GABRA4P48169 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC15.22■□□□□ 0.03
GABRA4P48169 AC004233.3-201ENST00000607794 1269 ntBASIC15.22■□□□□ 0.03
GABRA4P48169 AF228730.6-201ENST00000641497 218 ntBASIC15.22■□□□□ 0.03
GABRA4P48169 AC084121.3-201ENST00000641716 218 ntBASIC15.22■□□□□ 0.03
GABRA4P48169 AC105233.6-201ENST00000642093 218 ntBASIC15.22■□□□□ 0.03
GABRA4P48169 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
GABRA4P48169 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
GABRA4P48169 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
GABRA4P48169 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
GABRA4P48169 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
GABRA4P48169 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC15.22■□□□□ 0.03
GABRA4P48169 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC15.22■□□□□ 0.03
GABRA4P48169 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC15.22■□□□□ 0.03
GABRA4P48169 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
GABRA4P48169 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
GABRA4P48169 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
GABRA4P48169 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC15.22■□□□□ 0.03
GABRA4P48169 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
GABRA4P48169 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC15.22■□□□□ 0.03
GABRA4P48169 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
GABRA4P48169 GCK-209ENST00000616242 2260 ntTSL 5 BASIC15.22■□□□□ 0.03
GABRA4P48169 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
GABRA4P48169 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
GABRA4P48169 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
GABRA4P48169 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
GABRA4P48169 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
GABRA4P48169 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
GABRA4P48169 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
GABRA4P48169 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
GABRA4P48169 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
GABRA4P48169 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
GABRA4P48169 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC15.21■□□□□ 0.03
GABRA4P48169 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
GABRA4P48169 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
GABRA4P48169 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
GABRA4P48169 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
GABRA4P48169 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
GABRA4P48169 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
GABRA4P48169 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
GABRA4P48169 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
GABRA4P48169 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
GABRA4P48169 DOC2GP-202ENST00000514950 1163 ntBASIC15.21■□□□□ 0.03
GABRA4P48169 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
GABRA4P48169 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC15.21■□□□□ 0.03
GABRA4P48169 AL132655.2-201ENST00000596276 594 ntBASIC15.21■□□□□ 0.03
GABRA4P48169 AL662799.1-202ENST00000614205 422 ntBASIC15.21■□□□□ 0.03
GABRA4P48169 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC15.21■□□□□ 0.03
GABRA4P48169 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
GABRA4P48169 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
GABRA4P48169 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
GABRA4P48169 AC006449.5-201ENST00000610658 2098 ntBASIC15.21■□□□□ 0.03
GABRA4P48169 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
GABRA4P48169 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC15.21■□□□□ 0.02
GABRA4P48169 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
GABRA4P48169 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.02
GABRA4P48169 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
GABRA4P48169 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
GABRA4P48169 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
GABRA4P48169 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
GABRA4P48169 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
GABRA4P48169 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
GABRA4P48169 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
GABRA4P48169 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
GABRA4P48169 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
GABRA4P48169 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
GABRA4P48169 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC15.2■□□□□ 0.02
GABRA4P48169 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
GABRA4P48169 REXO1L1P-202ENST00000608646 1974 ntBASIC15.2■□□□□ 0.02
GABRA4P48169 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
GABRA4P48169 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC15.2■□□□□ 0.02
GABRA4P48169 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC15.2■□□□□ 0.02
GABRA4P48169 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC15.2■□□□□ 0.02
GABRA4P48169 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
GABRA4P48169 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
GABRA4P48169 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
GABRA4P48169 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
GABRA4P48169 SPDYE19P-201ENST00000338590 713 ntBASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms