Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NEDD4P46934 VMA21-202ENST00000370361 693 ntTSL 5 BASIC18.92■□□□□ 0.62
NEDD4P46934 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NEDD4P46934 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
NEDD4P46934 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
NEDD4P46934 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC18.92■□□□□ 0.62
NEDD4P46934 HNRNPA3P1-201ENST00000401429 1139 ntBASIC18.92■□□□□ 0.62
NEDD4P46934 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC18.92■□□□□ 0.62
NEDD4P46934 AC241585.1-201ENST00000433527 519 ntBASIC18.92■□□□□ 0.62
NEDD4P46934 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
NEDD4P46934 HNRNPA3P5-201ENST00000455201 833 ntBASIC18.92■□□□□ 0.62
NEDD4P46934 AC004890.2-204ENST00000481968 304 ntBASIC18.92■□□□□ 0.62
NEDD4P46934 LY6E-204ENST00000519546 971 ntTSL 2 BASIC18.92■□□□□ 0.62
NEDD4P46934 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
NEDD4P46934 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
NEDD4P46934 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC18.92■□□□□ 0.62
NEDD4P46934 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NEDD4P46934 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NEDD4P46934 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC18.92■□□□□ 0.62
NEDD4P46934 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
NEDD4P46934 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
NEDD4P46934 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
NEDD4P46934 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
NEDD4P46934 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NEDD4P46934 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC18.92■□□□□ 0.62
NEDD4P46934 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NEDD4P46934 AC008894.3-201ENST00000624324 3103 ntBASIC18.92■□□□□ 0.62
NEDD4P46934 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
NEDD4P46934 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NEDD4P46934 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
NEDD4P46934 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC18.91■□□□□ 0.62
NEDD4P46934 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
NEDD4P46934 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
NEDD4P46934 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NEDD4P46934 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
NEDD4P46934 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
NEDD4P46934 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NEDD4P46934 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.91■□□□□ 0.62
NEDD4P46934 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
NEDD4P46934 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
NEDD4P46934 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC18.91■□□□□ 0.62
NEDD4P46934 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC18.91■□□□□ 0.62
NEDD4P46934 UGT1A2P-201ENST00000454886 866 ntBASIC18.91■□□□□ 0.62
NEDD4P46934 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC18.91■□□□□ 0.62
NEDD4P46934 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC18.91■□□□□ 0.62
NEDD4P46934 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC18.91■□□□□ 0.62
NEDD4P46934 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC18.91■□□□□ 0.62
NEDD4P46934 EHF-205ENST00000527935 557 ntTSL 2 BASIC18.91■□□□□ 0.62
NEDD4P46934 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
NEDD4P46934 AQP6-203ENST00000551733 849 ntTSL 3 BASIC18.91■□□□□ 0.62
NEDD4P46934 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC18.91■□□□□ 0.62
NEDD4P46934 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC18.91■□□□□ 0.62
NEDD4P46934 SPIB-207ENST00000597855 564 ntTSL 4 BASIC18.91■□□□□ 0.62
NEDD4P46934 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC18.91■□□□□ 0.62
NEDD4P46934 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NEDD4P46934 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
NEDD4P46934 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NEDD4P46934 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NEDD4P46934 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC18.91■□□□□ 0.62
NEDD4P46934 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC18.91■□□□□ 0.62
NEDD4P46934 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
NEDD4P46934 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NEDD4P46934 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NEDD4P46934 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NEDD4P46934 AC011477.6-201ENST00000604980 1927 ntBASIC18.9■□□□□ 0.62
NEDD4P46934 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
NEDD4P46934 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NEDD4P46934 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NEDD4P46934 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NEDD4P46934 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NEDD4P46934 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
NEDD4P46934 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
NEDD4P46934 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
NEDD4P46934 ACE-203ENST00000413513 2237 ntTSL 2 BASIC18.9■□□□□ 0.62
NEDD4P46934 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC18.9■□□□□ 0.62
NEDD4P46934 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC18.9■□□□□ 0.62
NEDD4P46934 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
NEDD4P46934 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
NEDD4P46934 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
NEDD4P46934 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC18.9■□□□□ 0.62
NEDD4P46934 ELP6-209ENST00000446787 894 ntTSL 3 BASIC18.9■□□□□ 0.62
NEDD4P46934 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC18.9■□□□□ 0.62
NEDD4P46934 AC009477.1-201ENST00000452936 217 ntBASIC18.9■□□□□ 0.62
NEDD4P46934 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NEDD4P46934 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
NEDD4P46934 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC18.9■□□□□ 0.62
NEDD4P46934 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
NEDD4P46934 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
NEDD4P46934 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC18.9■□□□□ 0.62
NEDD4P46934 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC18.9■□□□□ 0.62
NEDD4P46934 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NEDD4P46934 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NEDD4P46934 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
NEDD4P46934 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NEDD4P46934 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NEDD4P46934 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
NEDD4P46934 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC18.89■□□□□ 0.61
NEDD4P46934 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NEDD4P46934 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC18.89■□□□□ 0.61
NEDD4P46934 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms