Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC17.74■□□□□ 0.43
HTTP42858 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC17.74■□□□□ 0.43
HTTP42858 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
HTTP42858 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
HTTP42858 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC17.73■□□□□ 0.43
HTTP42858 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HTTP42858 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC17.73■□□□□ 0.43
HTTP42858 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC17.73■□□□□ 0.43
HTTP42858 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.73■□□□□ 0.43
HTTP42858 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
HTTP42858 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
HTTP42858 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HTTP42858 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC17.73■□□□□ 0.43
HTTP42858 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HTTP42858 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC17.73■□□□□ 0.43
HTTP42858 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
HTTP42858 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC17.73■□□□□ 0.43
HTTP42858 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HTTP42858 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
HTTP42858 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC17.73■□□□□ 0.43
HTTP42858 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC17.73■□□□□ 0.43
HTTP42858 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC17.73■□□□□ 0.43
HTTP42858 CTBP2P4-201ENST00000513884 920 ntBASIC17.73■□□□□ 0.43
HTTP42858 MIR3147-201ENST00000577811 66 ntBASIC17.73■□□□□ 0.43
HTTP42858 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC17.73■□□□□ 0.43
HTTP42858 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
HTTP42858 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC17.73■□□□□ 0.43
HTTP42858 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
HTTP42858 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
HTTP42858 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HTTP42858 AMT-233ENST00000636522 1620 ntTSL 2 BASIC17.73■□□□□ 0.43
HTTP42858 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HTTP42858 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.72■□□□□ 0.43
HTTP42858 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC17.72■□□□□ 0.43
HTTP42858 RNA5SP486-201ENST00000515961 83 ntBASIC17.72■□□□□ 0.43
HTTP42858 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
HTTP42858 KSR1-207ENST00000578981 748 ntTSL 4 BASIC17.72■□□□□ 0.43
HTTP42858 WT1-AS_6.1-201ENST00000614919 121 ntBASIC17.72■□□□□ 0.43
HTTP42858 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC17.72■□□□□ 0.43
HTTP42858 AC068880.1-201ENST00000507289 2297 ntBASIC17.72■□□□□ 0.43
HTTP42858 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC17.72■□□□□ 0.43
HTTP42858 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.72■□□□□ 0.43
HTTP42858 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HTTP42858 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HTTP42858 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC17.72■□□□□ 0.43
HTTP42858 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC17.72■□□□□ 0.43
HTTP42858 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.72■□□□□ 0.43
HTTP42858 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC17.72■□□□□ 0.43
HTTP42858 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC17.72■□□□□ 0.43
HTTP42858 ZBTB45P2-201ENST00000452245 1531 ntBASIC17.72■□□□□ 0.43
HTTP42858 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HTTP42858 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HTTP42858 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HTTP42858 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HTTP42858 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
HTTP42858 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HTTP42858 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
HTTP42858 AC245100.5-201ENST00000452108 331 ntBASIC17.72■□□□□ 0.43
HTTP42858 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC17.72■□□□□ 0.43
HTTP42858 RN7SL48P-201ENST00000579283 293 ntBASIC17.72■□□□□ 0.43
HTTP42858 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC17.72■□□□□ 0.43
HTTP42858 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
HTTP42858 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
HTTP42858 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
HTTP42858 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HTTP42858 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
HTTP42858 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
HTTP42858 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC17.72■□□□□ 0.43
HTTP42858 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HTTP42858 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC17.72■□□□□ 0.43
HTTP42858 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
HTTP42858 AC135983.4-201ENST00000564116 1262 ntBASIC17.72■□□□□ 0.43
HTTP42858 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HTTP42858 AC022748.3-201ENST00000621828 275 ntBASIC17.72■□□□□ 0.43
HTTP42858 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HTTP42858 AC141586.5-201ENST00000624546 2050 ntBASIC17.71■□□□□ 0.43
HTTP42858 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC17.71■□□□□ 0.43
HTTP42858 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC17.71■□□□□ 0.43
HTTP42858 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
HTTP42858 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HTTP42858 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
HTTP42858 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC17.71■□□□□ 0.43
HTTP42858 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
HTTP42858 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC17.71■□□□□ 0.43
HTTP42858 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC17.71■□□□□ 0.43
HTTP42858 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
HTTP42858 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC17.71■□□□□ 0.43
HTTP42858 AC011491.1-203ENST00000637688 543 ntBASIC17.71■□□□□ 0.43
HTTP42858 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HTTP42858 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
HTTP42858 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HTTP42858 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
HTTP42858 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.71■□□□□ 0.43
HTTP42858 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
HTTP42858 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HTTP42858 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HTTP42858 PGGT1BP2-201ENST00000398621 1028 ntBASIC17.71■□□□□ 0.43
HTTP42858 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC17.71■□□□□ 0.43
HTTP42858 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
HTTP42858 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms