Protein–RNA interactions for Protein: P40426

PBX3, Pre-B-cell leukemia transcription factor 3, humanhuman

Predictions only

Length 434 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3P40426 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PBX3P40426 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC17.13■□□□□ 0.33
PBX3P40426 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC17.13■□□□□ 0.33
PBX3P40426 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
PBX3P40426 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
PBX3P40426 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PBX3P40426 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC17.13■□□□□ 0.33
PBX3P40426 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PBX3P40426 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC17.13■□□□□ 0.33
PBX3P40426 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
PBX3P40426 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PBX3P40426 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
PBX3P40426 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PBX3P40426 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC17.13■□□□□ 0.33
PBX3P40426 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PBX3P40426 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC17.13■□□□□ 0.33
PBX3P40426 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC17.13■□□□□ 0.33
PBX3P40426 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC17.13■□□□□ 0.33
PBX3P40426 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PBX3P40426 HNRNPA1P13-201ENST00000510646 963 ntBASIC17.13■□□□□ 0.33
PBX3P40426 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC17.13■□□□□ 0.33
PBX3P40426 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC17.13■□□□□ 0.33
PBX3P40426 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PBX3P40426 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
PBX3P40426 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC17.13■□□□□ 0.33
PBX3P40426 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PBX3P40426 COX11-210ENST00000639671 696 ntBASIC17.13■□□□□ 0.33
PBX3P40426 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.13■□□□□ 0.33
PBX3P40426 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PBX3P40426 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
PBX3P40426 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.13■□□□□ 0.33
PBX3P40426 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PBX3P40426 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC17.13■□□□□ 0.33
PBX3P40426 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
PBX3P40426 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PBX3P40426 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.13■□□□□ 0.33
PBX3P40426 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PBX3P40426 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PBX3P40426 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PBX3P40426 KRT8P37-201ENST00000451609 1420 ntBASIC17.13■□□□□ 0.33
PBX3P40426 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.12■□□□□ 0.33
PBX3P40426 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC17.12■□□□□ 0.33
PBX3P40426 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC17.12■□□□□ 0.33
PBX3P40426 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
PBX3P40426 AL592424.1-201ENST00000563624 1536 ntBASIC17.12■□□□□ 0.33
PBX3P40426 REXO1L6P-201ENST00000603433 1515 ntBASIC17.12■□□□□ 0.33
PBX3P40426 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PBX3P40426 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PBX3P40426 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
PBX3P40426 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.12■□□□□ 0.33
PBX3P40426 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
PBX3P40426 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PBX3P40426 BNIP3P1-202ENST00000550043 1585 ntBASIC17.12■□□□□ 0.33
PBX3P40426 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PBX3P40426 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PBX3P40426 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
PBX3P40426 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PBX3P40426 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PBX3P40426 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC17.12■□□□□ 0.33
PBX3P40426 AC004987.2-201ENST00000395959 1148 ntBASIC17.12■□□□□ 0.33
PBX3P40426 MPV17-208ENST00000405076 603 ntTSL 5 BASIC17.12■□□□□ 0.33
PBX3P40426 RPL13P2-201ENST00000440687 659 ntBASIC17.12■□□□□ 0.33
PBX3P40426 KRT223P-202ENST00000449164 1292 ntBASIC17.12■□□□□ 0.33
PBX3P40426 USP32P1-208ENST00000506594 1164 ntBASIC17.12■□□□□ 0.33
PBX3P40426 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC17.12■□□□□ 0.33
PBX3P40426 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PBX3P40426 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
PBX3P40426 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PBX3P40426 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.12■□□□□ 0.33
PBX3P40426 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PBX3P40426 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PBX3P40426 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PBX3P40426 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PBX3P40426 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PBX3P40426 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PBX3P40426 DEK-201ENST00000244776 1441 ntTSL 2 BASIC17.12■□□□□ 0.33
PBX3P40426 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC17.12■□□□□ 0.33
PBX3P40426 REXO1L8P-201ENST00000604378 1897 ntBASIC17.12■□□□□ 0.33
PBX3P40426 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
PBX3P40426 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PBX3P40426 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.11■□□□□ 0.33
PBX3P40426 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC17.11■□□□□ 0.33
PBX3P40426 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PBX3P40426 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PBX3P40426 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PBX3P40426 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PBX3P40426 KRT18P64-201ENST00000434946 1219 ntBASIC17.11■□□□□ 0.33
PBX3P40426 TARDBPP1-201ENST00000442013 1203 ntBASIC17.11■□□□□ 0.33
PBX3P40426 BNIP3P42-201ENST00000454982 569 ntBASIC17.11■□□□□ 0.33
PBX3P40426 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
PBX3P40426 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC17.11■□□□□ 0.33
PBX3P40426 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC17.11■□□□□ 0.33
PBX3P40426 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC17.11■□□□□ 0.33
PBX3P40426 BNIP3P29-201ENST00000598302 571 ntBASIC17.11■□□□□ 0.33
PBX3P40426 AC011447.5-201ENST00000616168 564 ntBASIC17.11■□□□□ 0.33
PBX3P40426 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC17.11■□□□□ 0.33
PBX3P40426 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
PBX3P40426 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PBX3P40426 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PBX3P40426 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms