Protein–RNA interactions for Protein: P35443

THBS4, Thrombospondin-4, humanhuman

Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS4P35443 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
THBS4P35443 CBR1-202ENST00000399191 838 ntTSL 3 BASIC14.24□□□□□ -0.13
THBS4P35443 FAM58DP-201ENST00000428076 619 ntBASIC14.24□□□□□ -0.13
THBS4P35443 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC14.24□□□□□ -0.13
THBS4P35443 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC14.24□□□□□ -0.13
THBS4P35443 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC14.24□□□□□ -0.13
THBS4P35443 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC14.24□□□□□ -0.13
THBS4P35443 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
THBS4P35443 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
THBS4P35443 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
THBS4P35443 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC14.24□□□□□ -0.13
THBS4P35443 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC14.24□□□□□ -0.13
THBS4P35443 AC093028.1-201ENST00000622998 982 ntBASIC14.24□□□□□ -0.13
THBS4P35443 AC009093.7-201ENST00000623853 1223 ntBASIC14.24□□□□□ -0.13
THBS4P35443 AC008267.7-201ENST00000624570 1194 ntBASIC14.24□□□□□ -0.13
THBS4P35443 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
THBS4P35443 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
THBS4P35443 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
THBS4P35443 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
THBS4P35443 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC14.24□□□□□ -0.13
THBS4P35443 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
THBS4P35443 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
THBS4P35443 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
THBS4P35443 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC14.24□□□□□ -0.13
THBS4P35443 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
THBS4P35443 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC14.24□□□□□ -0.13
THBS4P35443 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
THBS4P35443 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
THBS4P35443 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC14.24□□□□□ -0.13
THBS4P35443 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
THBS4P35443 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC14.24□□□□□ -0.13
THBS4P35443 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC14.24□□□□□ -0.13
THBS4P35443 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
THBS4P35443 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC14.23□□□□□ -0.13
THBS4P35443 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC14.23□□□□□ -0.13
THBS4P35443 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
THBS4P35443 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
THBS4P35443 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
THBS4P35443 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC14.23□□□□□ -0.13
THBS4P35443 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
THBS4P35443 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC14.23□□□□□ -0.13
THBS4P35443 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC14.23□□□□□ -0.13
THBS4P35443 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC14.23□□□□□ -0.13
THBS4P35443 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
THBS4P35443 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC14.23□□□□□ -0.13
THBS4P35443 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
THBS4P35443 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
THBS4P35443 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
THBS4P35443 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
THBS4P35443 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
THBS4P35443 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
THBS4P35443 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
THBS4P35443 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC14.23□□□□□ -0.13
THBS4P35443 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC14.23□□□□□ -0.13
THBS4P35443 HLA-J-203ENST00000494367 1087 ntBASIC14.23□□□□□ -0.13
THBS4P35443 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
THBS4P35443 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC14.23□□□□□ -0.13
THBS4P35443 AC109322.1-201ENST00000524499 1264 ntBASIC14.23□□□□□ -0.13
THBS4P35443 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC14.23□□□□□ -0.13
THBS4P35443 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC14.23□□□□□ -0.13
THBS4P35443 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC14.23□□□□□ -0.13
THBS4P35443 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC14.23□□□□□ -0.13
THBS4P35443 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC14.23□□□□□ -0.13
THBS4P35443 LINC00628-201ENST00000628516 1289 ntBASIC14.23□□□□□ -0.13
THBS4P35443 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC14.23□□□□□ -0.13
THBS4P35443 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
THBS4P35443 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC14.23□□□□□ -0.13
THBS4P35443 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
THBS4P35443 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
THBS4P35443 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
THBS4P35443 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
THBS4P35443 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC14.23□□□□□ -0.13
THBS4P35443 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
THBS4P35443 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC14.23□□□□□ -0.13
THBS4P35443 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC14.23□□□□□ -0.13
THBS4P35443 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC14.23□□□□□ -0.13
THBS4P35443 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
THBS4P35443 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
THBS4P35443 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
THBS4P35443 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
THBS4P35443 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC14.23□□□□□ -0.13
THBS4P35443 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
THBS4P35443 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
THBS4P35443 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
THBS4P35443 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
THBS4P35443 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
THBS4P35443 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
THBS4P35443 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC14.22□□□□□ -0.13
THBS4P35443 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC14.22□□□□□ -0.13
THBS4P35443 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
THBS4P35443 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
THBS4P35443 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
THBS4P35443 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
THBS4P35443 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
THBS4P35443 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
THBS4P35443 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
THBS4P35443 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
THBS4P35443 AL592424.1-201ENST00000563624 1536 ntBASIC14.22□□□□□ -0.13
THBS4P35443 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
THBS4P35443 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms