Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC17.1■□□□□ 0.33
CTNNA1P35221 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC17.1■□□□□ 0.33
CTNNA1P35221 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CTNNA1P35221 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CTNNA1P35221 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CTNNA1P35221 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CTNNA1P35221 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CTNNA1P35221 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CTNNA1P35221 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC17.09■□□□□ 0.33
CTNNA1P35221 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CTNNA1P35221 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
CTNNA1P35221 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CTNNA1P35221 AL031284.1-201ENST00000419297 478 ntBASIC17.09■□□□□ 0.33
CTNNA1P35221 HCG4B-203ENST00000450128 991 ntBASIC17.09■□□□□ 0.33
CTNNA1P35221 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CTNNA1P35221 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC17.09■□□□□ 0.33
CTNNA1P35221 UNC93B6-202ENST00000528242 690 ntBASIC17.09■□□□□ 0.33
CTNNA1P35221 THTPA-204ENST00000554970 569 ntTSL 4 BASIC17.09■□□□□ 0.33
CTNNA1P35221 THTPA-206ENST00000556015 535 ntTSL 3 BASIC17.09■□□□□ 0.33
CTNNA1P35221 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CTNNA1P35221 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
CTNNA1P35221 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CTNNA1P35221 RN7SL510P-201ENST00000581311 263 ntBASIC17.09■□□□□ 0.33
CTNNA1P35221 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC17.09■□□□□ 0.33
CTNNA1P35221 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC17.09■□□□□ 0.33
CTNNA1P35221 AL009183.1-201ENST00000603760 355 ntBASIC17.09■□□□□ 0.33
CTNNA1P35221 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC17.09■□□□□ 0.33
CTNNA1P35221 AC126755.1-201ENST00000525846 6405 ntBASIC17.09■□□□□ 0.33
CTNNA1P35221 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC17.09■□□□□ 0.33
CTNNA1P35221 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC17.09■□□□□ 0.33
CTNNA1P35221 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC17.09■□□□□ 0.33
CTNNA1P35221 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CTNNA1P35221 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CTNNA1P35221 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CTNNA1P35221 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CTNNA1P35221 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC17.09■□□□□ 0.33
CTNNA1P35221 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CTNNA1P35221 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CTNNA1P35221 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
CTNNA1P35221 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC17.08■□□□□ 0.33
CTNNA1P35221 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
CTNNA1P35221 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CTNNA1P35221 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CTNNA1P35221 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC17.08■□□□□ 0.33
CTNNA1P35221 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
CTNNA1P35221 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CTNNA1P35221 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
CTNNA1P35221 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
CTNNA1P35221 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC17.08■□□□□ 0.33
CTNNA1P35221 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
CTNNA1P35221 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CTNNA1P35221 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CTNNA1P35221 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CTNNA1P35221 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CTNNA1P35221 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
CTNNA1P35221 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CTNNA1P35221 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC17.08■□□□□ 0.32
CTNNA1P35221 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC17.08■□□□□ 0.32
CTNNA1P35221 CSF3-203ENST00000394148 622 ntTSL 3 BASIC17.08■□□□□ 0.32
CTNNA1P35221 RHOQP3-201ENST00000437982 621 ntBASIC17.08■□□□□ 0.32
CTNNA1P35221 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC17.08■□□□□ 0.32
CTNNA1P35221 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
CTNNA1P35221 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC17.08■□□□□ 0.32
CTNNA1P35221 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC17.08■□□□□ 0.32
CTNNA1P35221 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CTNNA1P35221 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC17.08■□□□□ 0.32
CTNNA1P35221 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC17.08■□□□□ 0.32
CTNNA1P35221 AC104692.2-201ENST00000603054 253 ntBASIC17.08■□□□□ 0.32
CTNNA1P35221 AC010507.1-201ENST00000633895 436 ntBASIC17.08■□□□□ 0.32
CTNNA1P35221 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CTNNA1P35221 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC17.08■□□□□ 0.32
CTNNA1P35221 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CTNNA1P35221 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CTNNA1P35221 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC17.07■□□□□ 0.32
CTNNA1P35221 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CTNNA1P35221 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CTNNA1P35221 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CTNNA1P35221 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CTNNA1P35221 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CTNNA1P35221 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC17.07■□□□□ 0.32
CTNNA1P35221 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CTNNA1P35221 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC17.07■□□□□ 0.32
CTNNA1P35221 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
CTNNA1P35221 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CTNNA1P35221 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC17.07■□□□□ 0.32
CTNNA1P35221 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CTNNA1P35221 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC17.07■□□□□ 0.32
CTNNA1P35221 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CTNNA1P35221 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CTNNA1P35221 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CTNNA1P35221 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CTNNA1P35221 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CTNNA1P35221 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CTNNA1P35221 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CTNNA1P35221 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CTNNA1P35221 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC17.07■□□□□ 0.32
CTNNA1P35221 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CTNNA1P35221 CFL1-202ENST00000524553 860 ntTSL 2 BASIC17.07■□□□□ 0.32
CTNNA1P35221 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC17.07■□□□□ 0.32
CTNNA1P35221 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms