Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
MMP8P22894 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC16.92■□□□□ 0.3
MMP8P22894 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
MMP8P22894 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
MMP8P22894 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
MMP8P22894 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.92■□□□□ 0.3
MMP8P22894 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
MMP8P22894 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
MMP8P22894 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
MMP8P22894 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
MMP8P22894 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC16.92■□□□□ 0.3
MMP8P22894 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC16.92■□□□□ 0.3
MMP8P22894 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
MMP8P22894 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
MMP8P22894 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC16.92■□□□□ 0.3
MMP8P22894 AC023141.5-201ENST00000458585 616 ntBASIC16.92■□□□□ 0.3
MMP8P22894 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC16.92■□□□□ 0.3
MMP8P22894 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC16.92■□□□□ 0.3
MMP8P22894 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC16.92■□□□□ 0.3
MMP8P22894 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC16.92■□□□□ 0.3
MMP8P22894 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC16.92■□□□□ 0.3
MMP8P22894 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
MMP8P22894 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC16.92■□□□□ 0.3
MMP8P22894 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC16.92■□□□□ 0.3
MMP8P22894 AC134684.3-201ENST00000641758 218 ntBASIC16.92■□□□□ 0.3
MMP8P22894 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16.92■□□□□ 0.3
MMP8P22894 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
MMP8P22894 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
MMP8P22894 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
MMP8P22894 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
MMP8P22894 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
MMP8P22894 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.92■□□□□ 0.3
MMP8P22894 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.92■□□□□ 0.3
MMP8P22894 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
MMP8P22894 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
MMP8P22894 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC16.92■□□□□ 0.3
MMP8P22894 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16.92■□□□□ 0.3
MMP8P22894 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.92■□□□□ 0.3
MMP8P22894 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
MMP8P22894 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
MMP8P22894 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
MMP8P22894 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
MMP8P22894 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
MMP8P22894 LOX-206ENST00000639739 1626 ntTSL 5 BASIC16.92■□□□□ 0.3
MMP8P22894 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.92■□□□□ 0.3
MMP8P22894 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
MMP8P22894 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
MMP8P22894 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
MMP8P22894 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
MMP8P22894 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
MMP8P22894 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
MMP8P22894 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
MMP8P22894 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
MMP8P22894 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
MMP8P22894 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
MMP8P22894 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.91■□□□□ 0.3
MMP8P22894 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
MMP8P22894 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
MMP8P22894 KRT8P37-201ENST00000451609 1420 ntBASIC16.91■□□□□ 0.3
MMP8P22894 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
MMP8P22894 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
MMP8P22894 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
MMP8P22894 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
MMP8P22894 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
MMP8P22894 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC16.91■□□□□ 0.3
MMP8P22894 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
MMP8P22894 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
MMP8P22894 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
MMP8P22894 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC16.91■□□□□ 0.3
MMP8P22894 AL353705.2-201ENST00000428243 662 ntBASIC16.91■□□□□ 0.3
MMP8P22894 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC16.91■□□□□ 0.3
MMP8P22894 AC004967.1-201ENST00000453589 447 ntBASIC16.91■□□□□ 0.3
MMP8P22894 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC16.91■□□□□ 0.3
MMP8P22894 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC16.91■□□□□ 0.3
MMP8P22894 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
MMP8P22894 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
MMP8P22894 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
MMP8P22894 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC16.91■□□□□ 0.3
MMP8P22894 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
MMP8P22894 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
MMP8P22894 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
MMP8P22894 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
MMP8P22894 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC16.91■□□□□ 0.3
MMP8P22894 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
MMP8P22894 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC16.91■□□□□ 0.3
MMP8P22894 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.9■□□□□ 0.3
MMP8P22894 GOLGA6L17P-202ENST00000614358 1398 ntBASIC16.9■□□□□ 0.3
MMP8P22894 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
MMP8P22894 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.9■□□□□ 0.3
MMP8P22894 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC16.9■□□□□ 0.3
MMP8P22894 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
MMP8P22894 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
MMP8P22894 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
MMP8P22894 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
MMP8P22894 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC16.9■□□□□ 0.3
MMP8P22894 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
MMP8P22894 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
MMP8P22894 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
MMP8P22894 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
MMP8P22894 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 342.2 ms