Protein–RNA interactions for Protein: P20749

BCL3, B-cell lymphoma 3 protein, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCL3P20749 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
BCL3P20749 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
BCL3P20749 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
BCL3P20749 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
BCL3P20749 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC13.75□□□□□ -0.21
BCL3P20749 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC13.75□□□□□ -0.21
BCL3P20749 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
BCL3P20749 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
BCL3P20749 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
BCL3P20749 BSG-215ENST00000618006 1329 ntTSL 2 BASIC13.75□□□□□ -0.21
BCL3P20749 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
BCL3P20749 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
BCL3P20749 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
BCL3P20749 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
BCL3P20749 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
BCL3P20749 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
BCL3P20749 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
BCL3P20749 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
BCL3P20749 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
BCL3P20749 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
BCL3P20749 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
BCL3P20749 HNRNPA1P28-201ENST00000424481 961 ntBASIC13.75□□□□□ -0.21
BCL3P20749 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
BCL3P20749 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
BCL3P20749 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC13.75□□□□□ -0.21
BCL3P20749 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
BCL3P20749 AC245100.5-201ENST00000452108 331 ntBASIC13.75□□□□□ -0.21
BCL3P20749 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC13.75□□□□□ -0.21
BCL3P20749 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
BCL3P20749 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
BCL3P20749 NME4-212ENST00000621774 904 ntTSL 3 BASIC13.75□□□□□ -0.21
BCL3P20749 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC13.75□□□□□ -0.21
BCL3P20749 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
BCL3P20749 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC13.75□□□□□ -0.21
BCL3P20749 LINC00554-201ENST00000564841 3011 ntBASIC13.75□□□□□ -0.21
BCL3P20749 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
BCL3P20749 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
BCL3P20749 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
BCL3P20749 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
BCL3P20749 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC13.75□□□□□ -0.21
BCL3P20749 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
BCL3P20749 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
BCL3P20749 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
BCL3P20749 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC13.74□□□□□ -0.21
BCL3P20749 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
BCL3P20749 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
BCL3P20749 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC13.74□□□□□ -0.21
BCL3P20749 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
BCL3P20749 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC13.74□□□□□ -0.21
BCL3P20749 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC13.74□□□□□ -0.21
BCL3P20749 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC13.74□□□□□ -0.21
BCL3P20749 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
BCL3P20749 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
BCL3P20749 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
BCL3P20749 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
BCL3P20749 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
BCL3P20749 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC13.74□□□□□ -0.21
BCL3P20749 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
BCL3P20749 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
BCL3P20749 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
BCL3P20749 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
BCL3P20749 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
BCL3P20749 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
BCL3P20749 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC13.74□□□□□ -0.21
BCL3P20749 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC13.74□□□□□ -0.21
BCL3P20749 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
BCL3P20749 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC13.74□□□□□ -0.21
BCL3P20749 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
BCL3P20749 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC13.74□□□□□ -0.21
BCL3P20749 RARRES2P8-201ENST00000566335 367 ntBASIC13.74□□□□□ -0.21
BCL3P20749 AL138918.1-201ENST00000568306 659 ntBASIC13.74□□□□□ -0.21
BCL3P20749 MIR4321-201ENST00000592276 80 ntBASIC13.74□□□□□ -0.21
BCL3P20749 FAM197Y3-203ENST00000618346 717 ntBASIC13.74□□□□□ -0.21
BCL3P20749 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC13.74□□□□□ -0.21
BCL3P20749 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC13.74□□□□□ -0.21
BCL3P20749 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
BCL3P20749 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
BCL3P20749 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC13.74□□□□□ -0.21
BCL3P20749 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC13.74□□□□□ -0.21
BCL3P20749 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
BCL3P20749 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
BCL3P20749 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
BCL3P20749 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC13.74□□□□□ -0.21
BCL3P20749 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
BCL3P20749 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC13.74□□□□□ -0.21
BCL3P20749 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
BCL3P20749 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
BCL3P20749 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
BCL3P20749 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
BCL3P20749 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
BCL3P20749 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
BCL3P20749 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC13.73□□□□□ -0.21
BCL3P20749 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
BCL3P20749 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC13.73□□□□□ -0.21
BCL3P20749 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
BCL3P20749 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
BCL3P20749 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC13.73□□□□□ -0.21
BCL3P20749 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC13.73□□□□□ -0.21
BCL3P20749 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
BCL3P20749 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms