Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
RAB4AP20338 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
RAB4AP20338 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RAB4AP20338 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC12.44□□□□□ -0.42
RAB4AP20338 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
RAB4AP20338 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RAB4AP20338 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RAB4AP20338 DDT-203ENST00000403754 569 ntTSL 3 BASIC12.44□□□□□ -0.42
RAB4AP20338 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
RAB4AP20338 DDT-206ENST00000430101 573 ntTSL 2 BASIC12.44□□□□□ -0.42
RAB4AP20338 PON3-205ENST00000451904 1053 ntTSL 3 BASIC12.44□□□□□ -0.42
RAB4AP20338 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
RAB4AP20338 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
RAB4AP20338 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC12.44□□□□□ -0.42
RAB4AP20338 AC109462.3-201ENST00000573934 613 ntBASIC12.44□□□□□ -0.42
RAB4AP20338 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
RAB4AP20338 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RAB4AP20338 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
RAB4AP20338 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
RAB4AP20338 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RAB4AP20338 CICP17-201ENST00000418553 2377 ntBASIC12.44□□□□□ -0.42
RAB4AP20338 NIN-202ENST00000324330 4364 ntTSL 5 BASIC12.44□□□□□ -0.42
RAB4AP20338 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC12.44□□□□□ -0.42
RAB4AP20338 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC12.44□□□□□ -0.42
RAB4AP20338 AC117489.1-201ENST00000625169 3217 ntBASIC12.44□□□□□ -0.42
RAB4AP20338 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
RAB4AP20338 MADD-203ENST00000349238 5873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
RAB4AP20338 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
RAB4AP20338 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
RAB4AP20338 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC12.44□□□□□ -0.42
RAB4AP20338 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
RAB4AP20338 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
RAB4AP20338 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC12.44□□□□□ -0.42
RAB4AP20338 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
RAB4AP20338 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RAB4AP20338 NEK4-201ENST00000233027 6057 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
RAB4AP20338 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RAB4AP20338 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
RAB4AP20338 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RAB4AP20338 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RAB4AP20338 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
RAB4AP20338 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC12.43□□□□□ -0.42
RAB4AP20338 ATP2C2-AS1-201ENST00000565700 2998 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
RAB4AP20338 CACNA1G-214ENST00000505165 6633 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
RAB4AP20338 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC12.43□□□□□ -0.42
RAB4AP20338 AP005117.1-202ENST00000581724 1908 ntBASIC12.43□□□□□ -0.42
RAB4AP20338 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC12.43□□□□□ -0.42
RAB4AP20338 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RAB4AP20338 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RAB4AP20338 ROBO1-213ENST00000618846 7483 ntTSL 5 BASIC12.43□□□□□ -0.42
RAB4AP20338 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RAB4AP20338 CEP131-201ENST00000269392 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
RAB4AP20338 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RAB4AP20338 PPME1-201ENST00000328257 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RAB4AP20338 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RAB4AP20338 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
RAB4AP20338 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RAB4AP20338 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC12.43□□□□□ -0.42
RAB4AP20338 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
RAB4AP20338 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC12.43□□□□□ -0.42
RAB4AP20338 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
RAB4AP20338 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RAB4AP20338 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RAB4AP20338 TSPY14P-201ENST00000303979 915 ntBASIC12.43□□□□□ -0.42
RAB4AP20338 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC12.43□□□□□ -0.42
RAB4AP20338 AC012618.2-201ENST00000428058 849 ntBASIC12.43□□□□□ -0.42
RAB4AP20338 KRT18P48-201ENST00000434763 852 ntBASIC12.43□□□□□ -0.42
RAB4AP20338 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC12.43□□□□□ -0.42
RAB4AP20338 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC12.43□□□□□ -0.42
RAB4AP20338 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC12.43□□□□□ -0.42
RAB4AP20338 AC090192.1-201ENST00000517740 490 ntBASIC12.43□□□□□ -0.42
RAB4AP20338 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC12.43□□□□□ -0.42
RAB4AP20338 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC12.43□□□□□ -0.42
RAB4AP20338 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC12.43□□□□□ -0.42
RAB4AP20338 AC233702.5-201ENST00000584107 538 ntBASIC12.43□□□□□ -0.42
RAB4AP20338 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
RAB4AP20338 AC019129.2-201ENST00000609837 1235 ntBASIC12.43□□□□□ -0.42
RAB4AP20338 VAMP4-201ENST00000236192 5159 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
RAB4AP20338 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RAB4AP20338 ANTXR2-203ENST00000403729 8273 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RAB4AP20338 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RAB4AP20338 C1R-201ENST00000535233 2211 ntTSL 2 BASIC12.43□□□□□ -0.42
RAB4AP20338 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC12.43□□□□□ -0.42
RAB4AP20338 AC007614.4-201ENST00000564048 1827 ntBASIC12.43□□□□□ -0.42
RAB4AP20338 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
RAB4AP20338 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
RAB4AP20338 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC12.43□□□□□ -0.42
RAB4AP20338 SRD5A1-201ENST00000274192 7132 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RAB4AP20338 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
RAB4AP20338 ZHX2-201ENST00000314393 4624 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RAB4AP20338 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
RAB4AP20338 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RAB4AP20338 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RAB4AP20338 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC12.43□□□□□ -0.42
RAB4AP20338 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC12.43□□□□□ -0.42
RAB4AP20338 SULF1-202ENST00000402687 4891 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RAB4AP20338 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
RAB4AP20338 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RAB4AP20338 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
RAB4AP20338 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC12.42□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms