Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HLA-DPA1P20036 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HLA-DPA1P20036 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
HLA-DPA1P20036 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HLA-DPA1P20036 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HLA-DPA1P20036 AC112504.1-201ENST00000623415 1841 ntBASIC16.31■□□□□ 0.2
HLA-DPA1P20036 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HLA-DPA1P20036 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
HLA-DPA1P20036 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC16.3■□□□□ 0.2
HLA-DPA1P20036 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.3■□□□□ 0.2
HLA-DPA1P20036 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
HLA-DPA1P20036 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.3■□□□□ 0.2
HLA-DPA1P20036 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HLA-DPA1P20036 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.3■□□□□ 0.2
HLA-DPA1P20036 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HLA-DPA1P20036 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC16.3■□□□□ 0.2
HLA-DPA1P20036 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
HLA-DPA1P20036 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
HLA-DPA1P20036 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HLA-DPA1P20036 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HLA-DPA1P20036 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC16.3■□□□□ 0.2
HLA-DPA1P20036 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC16.3■□□□□ 0.2
HLA-DPA1P20036 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC16.3■□□□□ 0.2
HLA-DPA1P20036 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
HLA-DPA1P20036 AC093520.2-201ENST00000561830 333 ntBASIC16.3■□□□□ 0.2
HLA-DPA1P20036 RARRES2P9-201ENST00000565168 469 ntBASIC16.3■□□□□ 0.2
HLA-DPA1P20036 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC16.3■□□□□ 0.2
HLA-DPA1P20036 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HLA-DPA1P20036 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
HLA-DPA1P20036 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC16.3■□□□□ 0.2
HLA-DPA1P20036 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HLA-DPA1P20036 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.3■□□□□ 0.2
HLA-DPA1P20036 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC16.3■□□□□ 0.2
HLA-DPA1P20036 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC16.3■□□□□ 0.2
HLA-DPA1P20036 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HLA-DPA1P20036 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC16.3■□□□□ 0.2
HLA-DPA1P20036 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.3■□□□□ 0.2
HLA-DPA1P20036 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
HLA-DPA1P20036 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
HLA-DPA1P20036 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
HLA-DPA1P20036 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
HLA-DPA1P20036 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
HLA-DPA1P20036 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HLA-DPA1P20036 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HLA-DPA1P20036 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HLA-DPA1P20036 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC16.29■□□□□ 0.2
HLA-DPA1P20036 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC16.29■□□□□ 0.2
HLA-DPA1P20036 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
HLA-DPA1P20036 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
HLA-DPA1P20036 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC16.29■□□□□ 0.2
HLA-DPA1P20036 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC16.29■□□□□ 0.2
HLA-DPA1P20036 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.29■□□□□ 0.2
HLA-DPA1P20036 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
HLA-DPA1P20036 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
HLA-DPA1P20036 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HLA-DPA1P20036 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
HLA-DPA1P20036 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HLA-DPA1P20036 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
HLA-DPA1P20036 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16.29■□□□□ 0.2
HLA-DPA1P20036 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HLA-DPA1P20036 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
HLA-DPA1P20036 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
HLA-DPA1P20036 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC16.29■□□□□ 0.2
HLA-DPA1P20036 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HLA-DPA1P20036 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
HLA-DPA1P20036 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
HLA-DPA1P20036 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC16.29■□□□□ 0.2
HLA-DPA1P20036 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC16.29■□□□□ 0.2
HLA-DPA1P20036 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
HLA-DPA1P20036 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
HLA-DPA1P20036 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC16.29■□□□□ 0.2
HLA-DPA1P20036 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC16.29■□□□□ 0.2
HLA-DPA1P20036 AC009093.7-201ENST00000623853 1223 ntBASIC16.29■□□□□ 0.2
HLA-DPA1P20036 AC134684.3-201ENST00000641758 218 ntBASIC16.29■□□□□ 0.2
HLA-DPA1P20036 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HLA-DPA1P20036 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
HLA-DPA1P20036 AC010491.1-201ENST00000563101 2797 ntBASIC16.29■□□□□ 0.2
HLA-DPA1P20036 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.29■□□□□ 0.2
HLA-DPA1P20036 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC16.29■□□□□ 0.2
HLA-DPA1P20036 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
HLA-DPA1P20036 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC16.29■□□□□ 0.2
HLA-DPA1P20036 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HLA-DPA1P20036 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HLA-DPA1P20036 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HLA-DPA1P20036 ACE-203ENST00000413513 2237 ntTSL 2 BASIC16.29■□□□□ 0.2
HLA-DPA1P20036 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
HLA-DPA1P20036 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HLA-DPA1P20036 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
HLA-DPA1P20036 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HLA-DPA1P20036 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
HLA-DPA1P20036 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
HLA-DPA1P20036 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HLA-DPA1P20036 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
HLA-DPA1P20036 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
HLA-DPA1P20036 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
HLA-DPA1P20036 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC16.28■□□□□ 0.2
HLA-DPA1P20036 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HLA-DPA1P20036 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HLA-DPA1P20036 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HLA-DPA1P20036 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms