Protein–RNA interactions for Protein: P16619

CCL3L1, C-C motif chemokine 3-like 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L1P16619 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CCL3L1P16619 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC13.33□□□□□ -0.28
CCL3L1P16619 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC13.33□□□□□ -0.28
CCL3L1P16619 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCL3L1P16619 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CCL3L1P16619 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC13.33□□□□□ -0.28
CCL3L1P16619 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CCL3L1P16619 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCL3L1P16619 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC13.33□□□□□ -0.28
CCL3L1P16619 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC13.33□□□□□ -0.28
CCL3L1P16619 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCL3L1P16619 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
CCL3L1P16619 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CCL3L1P16619 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCL3L1P16619 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCL3L1P16619 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC13.33□□□□□ -0.28
CCL3L1P16619 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CCL3L1P16619 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CCL3L1P16619 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
CCL3L1P16619 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCL3L1P16619 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCL3L1P16619 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CCL3L1P16619 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CCL3L1P16619 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC13.33□□□□□ -0.28
CCL3L1P16619 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCL3L1P16619 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
CCL3L1P16619 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCL3L1P16619 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CCL3L1P16619 AC008677.1-201ENST00000519230 1561 ntBASIC13.32□□□□□ -0.28
CCL3L1P16619 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC13.32□□□□□ -0.28
CCL3L1P16619 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC13.32□□□□□ -0.28
CCL3L1P16619 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
CCL3L1P16619 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC13.32□□□□□ -0.28
CCL3L1P16619 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC13.32□□□□□ -0.28
CCL3L1P16619 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCL3L1P16619 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CCL3L1P16619 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CCL3L1P16619 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
CCL3L1P16619 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCL3L1P16619 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCL3L1P16619 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC13.32□□□□□ -0.28
CCL3L1P16619 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
CCL3L1P16619 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC13.32□□□□□ -0.28
CCL3L1P16619 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCL3L1P16619 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
CCL3L1P16619 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC13.32□□□□□ -0.28
CCL3L1P16619 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCL3L1P16619 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CCL3L1P16619 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC13.32□□□□□ -0.28
CCL3L1P16619 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCL3L1P16619 AC008894.3-201ENST00000624324 3103 ntBASIC13.32□□□□□ -0.28
CCL3L1P16619 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCL3L1P16619 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCL3L1P16619 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCL3L1P16619 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
CCL3L1P16619 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCL3L1P16619 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
CCL3L1P16619 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCL3L1P16619 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC13.32□□□□□ -0.28
CCL3L1P16619 AL353705.2-201ENST00000428243 662 ntBASIC13.32□□□□□ -0.28
CCL3L1P16619 AC245100.5-201ENST00000452108 331 ntBASIC13.32□□□□□ -0.28
CCL3L1P16619 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC13.32□□□□□ -0.28
CCL3L1P16619 VPS29-207ENST00000549970 818 ntTSL 3 BASIC13.32□□□□□ -0.28
CCL3L1P16619 PAM16-215ENST00000577031 548 ntTSL 4 BASIC13.32□□□□□ -0.28
CCL3L1P16619 MIR4453-201ENST00000584019 89 ntBASIC13.32□□□□□ -0.28
CCL3L1P16619 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC13.32□□□□□ -0.28
CCL3L1P16619 Z92544.3-201ENST00000624747 417 ntBASIC13.32□□□□□ -0.28
CCL3L1P16619 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC13.32□□□□□ -0.28
CCL3L1P16619 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCL3L1P16619 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCL3L1P16619 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
CCL3L1P16619 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
CCL3L1P16619 SUPT20HL2-201ENST00000486479 2409 ntBASIC13.32□□□□□ -0.28
CCL3L1P16619 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CCL3L1P16619 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC13.32□□□□□ -0.28
CCL3L1P16619 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
CCL3L1P16619 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCL3L1P16619 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CCL3L1P16619 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC13.32□□□□□ -0.28
CCL3L1P16619 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCL3L1P16619 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCL3L1P16619 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCL3L1P16619 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCL3L1P16619 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC13.31□□□□□ -0.28
CCL3L1P16619 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC13.31□□□□□ -0.28
CCL3L1P16619 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC13.31□□□□□ -0.28
CCL3L1P16619 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
CCL3L1P16619 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
CCL3L1P16619 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCL3L1P16619 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCL3L1P16619 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCL3L1P16619 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC13.31□□□□□ -0.28
CCL3L1P16619 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
CCL3L1P16619 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCL3L1P16619 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CCL3L1P16619 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCL3L1P16619 SPDYE7P-202ENST00000420373 878 ntBASIC13.31□□□□□ -0.28
CCL3L1P16619 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC13.31□□□□□ -0.28
CCL3L1P16619 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCL3L1P16619 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms