Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC15.78■□□□□ 0.12
CDH1P12830 KRT18P13-201ENST00000400056 1290 ntBASIC15.78■□□□□ 0.12
CDH1P12830 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC15.78■□□□□ 0.12
CDH1P12830 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC15.78■□□□□ 0.12
CDH1P12830 SPCS2P4-201ENST00000436160 681 ntBASIC15.78■□□□□ 0.12
CDH1P12830 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC15.78■□□□□ 0.12
CDH1P12830 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC15.78■□□□□ 0.12
CDH1P12830 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CDH1P12830 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
CDH1P12830 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC15.78■□□□□ 0.12
CDH1P12830 AC008267.7-201ENST00000624570 1194 ntBASIC15.78■□□□□ 0.12
CDH1P12830 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC15.78■□□□□ 0.12
CDH1P12830 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CDH1P12830 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CDH1P12830 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
CDH1P12830 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
CDH1P12830 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC15.78■□□□□ 0.12
CDH1P12830 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CDH1P12830 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CDH1P12830 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CDH1P12830 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC15.78■□□□□ 0.12
CDH1P12830 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC15.78■□□□□ 0.12
CDH1P12830 AL592424.1-201ENST00000563624 1536 ntBASIC15.78■□□□□ 0.12
CDH1P12830 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC15.78■□□□□ 0.12
CDH1P12830 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CDH1P12830 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CDH1P12830 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CDH1P12830 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CDH1P12830 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC15.78■□□□□ 0.12
CDH1P12830 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CDH1P12830 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
CDH1P12830 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CDH1P12830 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC15.77■□□□□ 0.12
CDH1P12830 AC010491.1-201ENST00000563101 2797 ntBASIC15.77■□□□□ 0.12
CDH1P12830 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
CDH1P12830 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
CDH1P12830 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CDH1P12830 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CDH1P12830 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
CDH1P12830 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC15.77■□□□□ 0.12
CDH1P12830 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CDH1P12830 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CDH1P12830 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC15.77■□□□□ 0.12
CDH1P12830 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC15.77■□□□□ 0.12
CDH1P12830 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC15.77■□□□□ 0.12
CDH1P12830 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC15.77■□□□□ 0.12
CDH1P12830 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC15.77■□□□□ 0.12
CDH1P12830 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CDH1P12830 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC15.77■□□□□ 0.12
CDH1P12830 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC15.77■□□□□ 0.12
CDH1P12830 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC15.77■□□□□ 0.12
CDH1P12830 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC15.77■□□□□ 0.12
CDH1P12830 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC15.77■□□□□ 0.12
CDH1P12830 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC15.77■□□□□ 0.12
CDH1P12830 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC15.77■□□□□ 0.12
CDH1P12830 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC15.77■□□□□ 0.12
CDH1P12830 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC15.77■□□□□ 0.11
CDH1P12830 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.11
CDH1P12830 SP100-205ENST00000409824 1802 ntTSL 5 BASIC15.77■□□□□ 0.11
CDH1P12830 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CDH1P12830 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC15.77■□□□□ 0.11
CDH1P12830 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC15.77■□□□□ 0.11
CDH1P12830 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
CDH1P12830 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CDH1P12830 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
CDH1P12830 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC15.77■□□□□ 0.11
CDH1P12830 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CDH1P12830 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDH1P12830 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC15.76■□□□□ 0.11
CDH1P12830 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
CDH1P12830 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CDH1P12830 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC15.76■□□□□ 0.11
CDH1P12830 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
CDH1P12830 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
CDH1P12830 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
CDH1P12830 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC15.76■□□□□ 0.11
CDH1P12830 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CDH1P12830 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDH1P12830 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
CDH1P12830 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CDH1P12830 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDH1P12830 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC15.76■□□□□ 0.11
CDH1P12830 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC15.76■□□□□ 0.11
CDH1P12830 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDH1P12830 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC15.76■□□□□ 0.11
CDH1P12830 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC15.76■□□□□ 0.11
CDH1P12830 AL592309.1-201ENST00000443127 649 ntBASIC15.76■□□□□ 0.11
CDH1P12830 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC15.76■□□□□ 0.11
CDH1P12830 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CDH1P12830 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC15.76■□□□□ 0.11
CDH1P12830 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC15.76■□□□□ 0.11
CDH1P12830 IGHV3-62-201ENST00000520057 340 ntBASIC15.76■□□□□ 0.11
CDH1P12830 AC105233.2-201ENST00000523697 349 ntBASIC15.76■□□□□ 0.11
CDH1P12830 AF228730.5-201ENST00000530288 346 ntBASIC15.76■□□□□ 0.11
CDH1P12830 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC15.76■□□□□ 0.11
CDH1P12830 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC15.76■□□□□ 0.11
CDH1P12830 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC15.76■□□□□ 0.11
CDH1P12830 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC15.76■□□□□ 0.11
CDH1P12830 AC073389.1-201ENST00000595595 795 ntBASIC15.76■□□□□ 0.11
CDH1P12830 AC022145.2-201ENST00000598203 171 ntBASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms