Protein–RNA interactions for Protein: P11230

CHRNB1, Acetylcholine receptor subunit beta, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1P11230 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC16.3■□□□□ 0.2
CHRNB1P11230 PDIA3P1-201ENST00000471856 1510 ntBASIC16.3■□□□□ 0.2
CHRNB1P11230 AL133338.1-201ENST00000565695 1517 ntBASIC16.3■□□□□ 0.2
CHRNB1P11230 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHRNB1P11230 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHRNB1P11230 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHRNB1P11230 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHRNB1P11230 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
CHRNB1P11230 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHRNB1P11230 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHRNB1P11230 KRT8P22-201ENST00000562317 1415 ntBASIC16.3■□□□□ 0.2
CHRNB1P11230 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC16.3■□□□□ 0.2
CHRNB1P11230 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
CHRNB1P11230 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
CHRNB1P11230 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CHRNB1P11230 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CHRNB1P11230 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHRNB1P11230 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CHRNB1P11230 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC16.3■□□□□ 0.2
CHRNB1P11230 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
CHRNB1P11230 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CHRNB1P11230 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC16.3■□□□□ 0.2
CHRNB1P11230 LBX2-201ENST00000341396 886 ntTSL 3 BASIC16.3■□□□□ 0.2
CHRNB1P11230 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC16.3■□□□□ 0.2
CHRNB1P11230 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CHRNB1P11230 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC16.3■□□□□ 0.2
CHRNB1P11230 CTBP2P5-201ENST00000454986 1264 ntBASIC16.3■□□□□ 0.2
CHRNB1P11230 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CHRNB1P11230 FXR1-221ENST00000491674 365 ntTSL 2 BASIC16.3■□□□□ 0.2
CHRNB1P11230 HNRNPA1P13-201ENST00000510646 963 ntBASIC16.3■□□□□ 0.2
CHRNB1P11230 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CHRNB1P11230 SUOX-214ENST00000551841 906 ntTSL 3 BASIC16.3■□□□□ 0.2
CHRNB1P11230 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC16.3■□□□□ 0.2
CHRNB1P11230 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC16.3■□□□□ 0.2
CHRNB1P11230 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC16.3■□□□□ 0.2
CHRNB1P11230 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC16.3■□□□□ 0.2
CHRNB1P11230 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC16.3■□□□□ 0.2
CHRNB1P11230 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC16.3■□□□□ 0.2
CHRNB1P11230 LINC01115-203ENST00000606068 577 ntBASIC16.3■□□□□ 0.2
CHRNB1P11230 AL365330.1-201ENST00000607459 531 ntBASIC16.3■□□□□ 0.2
CHRNB1P11230 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHRNB1P11230 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHRNB1P11230 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHRNB1P11230 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
CHRNB1P11230 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
CHRNB1P11230 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CHRNB1P11230 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC16.3■□□□□ 0.2
CHRNB1P11230 AC005622.1-201ENST00000636801 1703 ntBASIC16.3■□□□□ 0.2
CHRNB1P11230 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHRNB1P11230 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHRNB1P11230 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHRNB1P11230 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CHRNB1P11230 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CHRNB1P11230 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC16.3■□□□□ 0.2
CHRNB1P11230 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHRNB1P11230 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHRNB1P11230 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC16.29■□□□□ 0.2
CHRNB1P11230 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CHRNB1P11230 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CHRNB1P11230 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHRNB1P11230 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHRNB1P11230 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHRNB1P11230 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CHRNB1P11230 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHRNB1P11230 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CHRNB1P11230 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CHRNB1P11230 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC16.29■□□□□ 0.2
CHRNB1P11230 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHRNB1P11230 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHRNB1P11230 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC16.29■□□□□ 0.2
CHRNB1P11230 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
CHRNB1P11230 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CHRNB1P11230 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHRNB1P11230 AL442647.2-201ENST00000429864 857 ntBASIC16.29■□□□□ 0.2
CHRNB1P11230 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CHRNB1P11230 KLF2P4-201ENST00000451959 1225 ntBASIC16.29■□□□□ 0.2
CHRNB1P11230 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CHRNB1P11230 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
CHRNB1P11230 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC16.29■□□□□ 0.2
CHRNB1P11230 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC16.29■□□□□ 0.2
CHRNB1P11230 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC16.29■□□□□ 0.2
CHRNB1P11230 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC16.29■□□□□ 0.2
CHRNB1P11230 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
CHRNB1P11230 USB1-203ENST00000539737 1212 ntTSL 2 BASIC16.29■□□□□ 0.2
CHRNB1P11230 MIR6869-201ENST00000619434 62 ntBASIC16.29■□□□□ 0.2
CHRNB1P11230 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHRNB1P11230 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CHRNB1P11230 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHRNB1P11230 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC16.29■□□□□ 0.2
CHRNB1P11230 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHRNB1P11230 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CHRNB1P11230 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
CHRNB1P11230 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CHRNB1P11230 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CHRNB1P11230 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC16.28■□□□□ 0.2
CHRNB1P11230 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CHRNB1P11230 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHRNB1P11230 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CHRNB1P11230 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHRNB1P11230 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 69.2 ms