Protein–RNA interactions for Protein: P0CW24

PNMA6A, Paraneoplastic antigen-like protein 6A, humanhuman

Predicted RBP Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNMA6AP0CW24 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
PNMA6AP0CW24 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
PNMA6AP0CW24 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
PNMA6AP0CW24 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC17.68■□□□□ 0.42
PNMA6AP0CW24 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
PNMA6AP0CW24 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC17.68■□□□□ 0.42
PNMA6AP0CW24 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
PNMA6AP0CW24 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
PNMA6AP0CW24 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
PNMA6AP0CW24 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PNMA6AP0CW24 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
PNMA6AP0CW24 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PNMA6AP0CW24 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC17.68■□□□□ 0.42
PNMA6AP0CW24 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
PNMA6AP0CW24 CICP24-201ENST00000605464 2705 ntBASIC17.68■□□□□ 0.42
PNMA6AP0CW24 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PNMA6AP0CW24 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
PNMA6AP0CW24 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PNMA6AP0CW24 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
PNMA6AP0CW24 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
PNMA6AP0CW24 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PNMA6AP0CW24 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PNMA6AP0CW24 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
PNMA6AP0CW24 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
PNMA6AP0CW24 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PNMA6AP0CW24 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC17.68■□□□□ 0.42
PNMA6AP0CW24 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
PNMA6AP0CW24 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PNMA6AP0CW24 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC17.68■□□□□ 0.42
PNMA6AP0CW24 POU5F1P6-201ENST00000466990 990 ntBASIC17.68■□□□□ 0.42
PNMA6AP0CW24 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC17.68■□□□□ 0.42
PNMA6AP0CW24 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC17.68■□□□□ 0.42
PNMA6AP0CW24 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC17.68■□□□□ 0.42
PNMA6AP0CW24 AP003680.1-201ENST00000598970 3660 ntBASIC17.68■□□□□ 0.42
PNMA6AP0CW24 AL009183.1-201ENST00000603760 355 ntBASIC17.68■□□□□ 0.42
PNMA6AP0CW24 AC023141.13-201ENST00000604991 943 ntBASIC17.68■□□□□ 0.42
PNMA6AP0CW24 NME4-212ENST00000621774 904 ntTSL 3 BASIC17.68■□□□□ 0.42
PNMA6AP0CW24 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC17.68■□□□□ 0.42
PNMA6AP0CW24 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PNMA6AP0CW24 GSN-203ENST00000373808 2664 ntTSL 2 BASIC17.68■□□□□ 0.42
PNMA6AP0CW24 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC17.68■□□□□ 0.42
PNMA6AP0CW24 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC17.68■□□□□ 0.42
PNMA6AP0CW24 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
PNMA6AP0CW24 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC17.68■□□□□ 0.42
PNMA6AP0CW24 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC17.68■□□□□ 0.42
PNMA6AP0CW24 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PNMA6AP0CW24 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC17.67■□□□□ 0.42
PNMA6AP0CW24 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
PNMA6AP0CW24 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC17.67■□□□□ 0.42
PNMA6AP0CW24 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PNMA6AP0CW24 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PNMA6AP0CW24 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PNMA6AP0CW24 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC17.67■□□□□ 0.42
PNMA6AP0CW24 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC17.67■□□□□ 0.42
PNMA6AP0CW24 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC17.67■□□□□ 0.42
PNMA6AP0CW24 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PNMA6AP0CW24 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
PNMA6AP0CW24 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PNMA6AP0CW24 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
PNMA6AP0CW24 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC17.67■□□□□ 0.42
PNMA6AP0CW24 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
PNMA6AP0CW24 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PNMA6AP0CW24 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC17.67■□□□□ 0.42
PNMA6AP0CW24 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
PNMA6AP0CW24 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC17.67■□□□□ 0.42
PNMA6AP0CW24 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC17.67■□□□□ 0.42
PNMA6AP0CW24 AC021097.1-201ENST00000607902 574 ntBASIC17.67■□□□□ 0.42
PNMA6AP0CW24 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC17.67■□□□□ 0.42
PNMA6AP0CW24 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC17.67■□□□□ 0.42
PNMA6AP0CW24 AC092865.6-201ENST00000642101 219 ntBASIC17.67■□□□□ 0.42
PNMA6AP0CW24 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PNMA6AP0CW24 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PNMA6AP0CW24 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC17.67■□□□□ 0.42
PNMA6AP0CW24 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
PNMA6AP0CW24 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
PNMA6AP0CW24 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PNMA6AP0CW24 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
PNMA6AP0CW24 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC17.67■□□□□ 0.42
PNMA6AP0CW24 AC016027.1-202ENST00000607927 1699 ntBASIC17.67■□□□□ 0.42
PNMA6AP0CW24 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
PNMA6AP0CW24 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC17.67■□□□□ 0.42
PNMA6AP0CW24 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PNMA6AP0CW24 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
PNMA6AP0CW24 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PNMA6AP0CW24 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC17.66■□□□□ 0.42
PNMA6AP0CW24 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PNMA6AP0CW24 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC17.66■□□□□ 0.42
PNMA6AP0CW24 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PNMA6AP0CW24 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PNMA6AP0CW24 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PNMA6AP0CW24 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PNMA6AP0CW24 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC17.66■□□□□ 0.42
PNMA6AP0CW24 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PNMA6AP0CW24 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PNMA6AP0CW24 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PNMA6AP0CW24 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PNMA6AP0CW24 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PNMA6AP0CW24 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC17.66■□□□□ 0.42
PNMA6AP0CW24 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC17.66■□□□□ 0.42
PNMA6AP0CW24 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms