Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
CAPN1P07384 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC15.95■□□□□ 0.14
CAPN1P07384 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CAPN1P07384 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CAPN1P07384 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CAPN1P07384 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CAPN1P07384 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC15.95■□□□□ 0.14
CAPN1P07384 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CAPN1P07384 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC15.95■□□□□ 0.14
CAPN1P07384 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CAPN1P07384 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CAPN1P07384 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CAPN1P07384 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC15.95■□□□□ 0.14
CAPN1P07384 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
CAPN1P07384 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CAPN1P07384 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC15.95■□□□□ 0.14
CAPN1P07384 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CAPN1P07384 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CAPN1P07384 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC15.95■□□□□ 0.14
CAPN1P07384 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CAPN1P07384 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CAPN1P07384 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC15.95■□□□□ 0.14
CAPN1P07384 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC15.95■□□□□ 0.14
CAPN1P07384 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC15.95■□□□□ 0.14
CAPN1P07384 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CAPN1P07384 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CAPN1P07384 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CAPN1P07384 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CAPN1P07384 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CAPN1P07384 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC15.95■□□□□ 0.14
CAPN1P07384 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CAPN1P07384 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC15.95■□□□□ 0.14
CAPN1P07384 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CAPN1P07384 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CAPN1P07384 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CAPN1P07384 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC15.95■□□□□ 0.14
CAPN1P07384 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CAPN1P07384 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CAPN1P07384 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC15.95■□□□□ 0.14
CAPN1P07384 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CAPN1P07384 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC15.94■□□□□ 0.14
CAPN1P07384 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CAPN1P07384 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC15.94■□□□□ 0.14
CAPN1P07384 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CAPN1P07384 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CAPN1P07384 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
CAPN1P07384 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC15.94■□□□□ 0.14
CAPN1P07384 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC15.94■□□□□ 0.14
CAPN1P07384 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
CAPN1P07384 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CAPN1P07384 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CAPN1P07384 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
CAPN1P07384 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CAPN1P07384 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CAPN1P07384 AL136379.1-201ENST00000623471 2642 ntBASIC15.94■□□□□ 0.14
CAPN1P07384 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CAPN1P07384 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
CAPN1P07384 CD99-202ENST00000381180 530 ntTSL 2 BASIC15.94■□□□□ 0.14
CAPN1P07384 AL355306.1-201ENST00000415580 579 ntBASIC15.94■□□□□ 0.14
CAPN1P07384 TSEN15P1-201ENST00000423257 515 ntBASIC15.94■□□□□ 0.14
CAPN1P07384 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC15.94■□□□□ 0.14
CAPN1P07384 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
CAPN1P07384 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CAPN1P07384 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC15.94■□□□□ 0.14
CAPN1P07384 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
CAPN1P07384 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC15.94■□□□□ 0.14
CAPN1P07384 AL031055.1-201ENST00000606362 631 ntBASIC15.94■□□□□ 0.14
CAPN1P07384 AC021097.1-201ENST00000607902 574 ntBASIC15.94■□□□□ 0.14
CAPN1P07384 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CAPN1P07384 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
CAPN1P07384 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CAPN1P07384 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CAPN1P07384 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC15.94■□□□□ 0.14
CAPN1P07384 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC15.94■□□□□ 0.14
CAPN1P07384 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CAPN1P07384 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC15.94■□□□□ 0.14
CAPN1P07384 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
CAPN1P07384 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
CAPN1P07384 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CAPN1P07384 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CAPN1P07384 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
CAPN1P07384 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CAPN1P07384 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC15.94■□□□□ 0.14
CAPN1P07384 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CAPN1P07384 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC15.94■□□□□ 0.14
CAPN1P07384 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC15.94■□□□□ 0.14
CAPN1P07384 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC15.93■□□□□ 0.14
CAPN1P07384 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
CAPN1P07384 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CAPN1P07384 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC15.93■□□□□ 0.14
CAPN1P07384 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
CAPN1P07384 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC15.93■□□□□ 0.14
CAPN1P07384 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
CAPN1P07384 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CAPN1P07384 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
CAPN1P07384 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC15.93■□□□□ 0.14
CAPN1P07384 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
CAPN1P07384 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC15.93■□□□□ 0.14
CAPN1P07384 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CAPN1P07384 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC15.93■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms