Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC19.3■□□□□ 0.68
CHGBP05060 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
CHGBP05060 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHGBP05060 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHGBP05060 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CHGBP05060 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CHGBP05060 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHGBP05060 MIR648-201ENST00000385046 94 ntBASIC19.3■□□□□ 0.68
CHGBP05060 BASP1P1-201ENST00000430708 665 ntBASIC19.3■□□□□ 0.68
CHGBP05060 EEF1DP4-201ENST00000446006 880 ntBASIC19.3■□□□□ 0.68
CHGBP05060 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CHGBP05060 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC19.3■□□□□ 0.68
CHGBP05060 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC19.3■□□□□ 0.68
CHGBP05060 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
CHGBP05060 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC19.3■□□□□ 0.68
CHGBP05060 AL033527.5-202ENST00000641632 1098 ntBASIC19.3■□□□□ 0.68
CHGBP05060 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC19.3■□□□□ 0.68
CHGBP05060 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC19.3■□□□□ 0.68
CHGBP05060 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CHGBP05060 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC19.3■□□□□ 0.68
CHGBP05060 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
CHGBP05060 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CHGBP05060 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHGBP05060 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHGBP05060 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHGBP05060 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CHGBP05060 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHGBP05060 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHGBP05060 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHGBP05060 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC19.29■□□□□ 0.68
CHGBP05060 AL365203.3-201ENST00000609742 2057 ntBASIC19.29■□□□□ 0.68
CHGBP05060 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
CHGBP05060 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHGBP05060 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHGBP05060 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHGBP05060 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
CHGBP05060 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
CHGBP05060 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHGBP05060 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHGBP05060 KRT8P37-201ENST00000451609 1420 ntBASIC19.29■□□□□ 0.68
CHGBP05060 HCG11-201ENST00000411553 5696 ntBASIC19.29■□□□□ 0.68
CHGBP05060 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHGBP05060 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CHGBP05060 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
CHGBP05060 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC19.29■□□□□ 0.68
CHGBP05060 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CHGBP05060 AC004987.2-201ENST00000395959 1148 ntBASIC19.29■□□□□ 0.68
CHGBP05060 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC19.29■□□□□ 0.68
CHGBP05060 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC19.29■□□□□ 0.68
CHGBP05060 AL589987.1-201ENST00000453380 819 ntBASIC19.29■□□□□ 0.68
CHGBP05060 INGX-202ENST00000489074 768 ntBASIC19.29■□□□□ 0.68
CHGBP05060 LY6E-204ENST00000519546 971 ntTSL 2 BASIC19.29■□□□□ 0.68
CHGBP05060 AC026979.3-201ENST00000607315 403 ntBASIC19.29■□□□□ 0.68
CHGBP05060 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC19.29■□□□□ 0.68
CHGBP05060 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC19.29■□□□□ 0.68
CHGBP05060 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHGBP05060 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
CHGBP05060 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHGBP05060 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CHGBP05060 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHGBP05060 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHGBP05060 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHGBP05060 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHGBP05060 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC19.28■□□□□ 0.68
CHGBP05060 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC19.28■□□□□ 0.68
CHGBP05060 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC19.28■□□□□ 0.68
CHGBP05060 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CHGBP05060 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHGBP05060 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHGBP05060 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHGBP05060 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHGBP05060 KLK8-202ENST00000320838 456 ntTSL 5 BASIC19.28■□□□□ 0.68
CHGBP05060 AC236430.1-201ENST00000402231 743 ntBASIC19.28■□□□□ 0.68
CHGBP05060 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHGBP05060 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CHGBP05060 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC19.28■□□□□ 0.68
CHGBP05060 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC19.28■□□□□ 0.68
CHGBP05060 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CHGBP05060 PTK7-212ENST00000476760 902 ntTSL 2 BASIC19.28■□□□□ 0.68
CHGBP05060 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC19.28■□□□□ 0.68
CHGBP05060 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC19.28■□□□□ 0.68
CHGBP05060 PRR29-209ENST00000582540 967 ntTSL 2 BASIC19.28■□□□□ 0.68
CHGBP05060 RN7SL204P-201ENST00000582831 262 ntBASIC19.28■□□□□ 0.68
CHGBP05060 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC19.28■□□□□ 0.68
CHGBP05060 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
CHGBP05060 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC19.28■□□□□ 0.68
CHGBP05060 AL109936.8-201ENST00000641772 604 ntBASIC19.28■□□□□ 0.68
CHGBP05060 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC19.28■□□□□ 0.68
CHGBP05060 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHGBP05060 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC19.28■□□□□ 0.68
CHGBP05060 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHGBP05060 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHGBP05060 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC19.28■□□□□ 0.68
CHGBP05060 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CHGBP05060 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHGBP05060 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC19.28■□□□□ 0.68
CHGBP05060 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
CHGBP05060 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC19.28■□□□□ 0.68
CHGBP05060 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHGBP05060 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms