Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
HLA-DPB1P04440 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.59□□□□□ -0.07
HLA-DPB1P04440 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
HLA-DPB1P04440 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC14.59□□□□□ -0.07
HLA-DPB1P04440 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC14.59□□□□□ -0.07
HLA-DPB1P04440 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
HLA-DPB1P04440 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
HLA-DPB1P04440 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC14.59□□□□□ -0.07
HLA-DPB1P04440 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
HLA-DPB1P04440 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
HLA-DPB1P04440 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC14.59□□□□□ -0.07
HLA-DPB1P04440 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
HLA-DPB1P04440 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HLA-DPB1P04440 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
HLA-DPB1P04440 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC14.59□□□□□ -0.07
HLA-DPB1P04440 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
HLA-DPB1P04440 AC020658.6-201ENST00000623564 1870 ntBASIC14.59□□□□□ -0.07
HLA-DPB1P04440 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
HLA-DPB1P04440 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
HLA-DPB1P04440 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC14.58□□□□□ -0.07
HLA-DPB1P04440 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC14.58□□□□□ -0.07
HLA-DPB1P04440 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.07
HLA-DPB1P04440 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC14.58□□□□□ -0.07
HLA-DPB1P04440 MYO15B-237ENST00000642007 4893 ntBASIC14.58□□□□□ -0.07
HLA-DPB1P04440 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
HLA-DPB1P04440 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC14.58□□□□□ -0.08
HLA-DPB1P04440 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC14.58□□□□□ -0.08
HLA-DPB1P04440 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
HLA-DPB1P04440 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
HLA-DPB1P04440 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HLA-DPB1P04440 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HLA-DPB1P04440 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
HLA-DPB1P04440 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HLA-DPB1P04440 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HLA-DPB1P04440 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HLA-DPB1P04440 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC14.58□□□□□ -0.08
HLA-DPB1P04440 AC073621.1-201ENST00000392730 636 ntBASIC14.58□□□□□ -0.08
HLA-DPB1P04440 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC14.58□□□□□ -0.08
HLA-DPB1P04440 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC14.58□□□□□ -0.08
HLA-DPB1P04440 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC14.58□□□□□ -0.08
HLA-DPB1P04440 AL356488.2-201ENST00000602755 427 ntBASIC14.58□□□□□ -0.08
HLA-DPB1P04440 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC14.58□□□□□ -0.08
HLA-DPB1P04440 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC14.58□□□□□ -0.08
HLA-DPB1P04440 MIR7706-201ENST00000613747 67 ntBASIC14.58□□□□□ -0.08
HLA-DPB1P04440 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.08
HLA-DPB1P04440 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.08
HLA-DPB1P04440 PGM5P2-202ENST00000637225 1043 ntBASIC14.58□□□□□ -0.08
HLA-DPB1P04440 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC14.58□□□□□ -0.08
HLA-DPB1P04440 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HLA-DPB1P04440 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC14.58□□□□□ -0.08
HLA-DPB1P04440 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HLA-DPB1P04440 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HLA-DPB1P04440 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HLA-DPB1P04440 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC14.58□□□□□ -0.08
HLA-DPB1P04440 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HLA-DPB1P04440 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HLA-DPB1P04440 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HLA-DPB1P04440 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HLA-DPB1P04440 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
HLA-DPB1P04440 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
HLA-DPB1P04440 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
HLA-DPB1P04440 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC14.58□□□□□ -0.08
HLA-DPB1P04440 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC14.58□□□□□ -0.08
HLA-DPB1P04440 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HLA-DPB1P04440 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HLA-DPB1P04440 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
HLA-DPB1P04440 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
HLA-DPB1P04440 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC14.57□□□□□ -0.08
HLA-DPB1P04440 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
HLA-DPB1P04440 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC14.57□□□□□ -0.08
HLA-DPB1P04440 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HLA-DPB1P04440 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HLA-DPB1P04440 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HLA-DPB1P04440 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC14.57□□□□□ -0.08
HLA-DPB1P04440 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HLA-DPB1P04440 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
HLA-DPB1P04440 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC14.57□□□□□ -0.08
HLA-DPB1P04440 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
HLA-DPB1P04440 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
HLA-DPB1P04440 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
HLA-DPB1P04440 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
HLA-DPB1P04440 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
HLA-DPB1P04440 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC14.57□□□□□ -0.08
HLA-DPB1P04440 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HLA-DPB1P04440 AC136621.1-201ENST00000624017 2304 ntBASIC14.57□□□□□ -0.08
HLA-DPB1P04440 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
HLA-DPB1P04440 AC092919.2-201ENST00000623631 1645 ntBASIC14.57□□□□□ -0.08
HLA-DPB1P04440 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC14.57□□□□□ -0.08
HLA-DPB1P04440 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC14.57□□□□□ -0.08
HLA-DPB1P04440 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HLA-DPB1P04440 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC14.57□□□□□ -0.08
HLA-DPB1P04440 WDR53-204ENST00000433160 887 ntTSL 5 BASIC14.57□□□□□ -0.08
HLA-DPB1P04440 PPIE-208ENST00000470213 927 ntTSL 3 BASIC14.57□□□□□ -0.08
HLA-DPB1P04440 RPS15P9-201ENST00000494093 319 ntBASIC14.57□□□□□ -0.08
HLA-DPB1P04440 AC079776.4-201ENST00000511039 504 ntBASIC14.57□□□□□ -0.08
HLA-DPB1P04440 AC136632.2-201ENST00000512891 861 ntBASIC14.57□□□□□ -0.08
HLA-DPB1P04440 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
HLA-DPB1P04440 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC14.57□□□□□ -0.08
HLA-DPB1P04440 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC14.57□□□□□ -0.08
HLA-DPB1P04440 AP001005.1-201ENST00000571755 1248 ntBASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms