Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CD74P04233 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CD74P04233 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CD74P04233 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC13.61□□□□□ -0.23
CD74P04233 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CD74P04233 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC13.61□□□□□ -0.23
CD74P04233 RER1-203ENST00000378513 3000 ntTSL 3 BASIC13.61□□□□□ -0.23
CD74P04233 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CD74P04233 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CD74P04233 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
CD74P04233 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
CD74P04233 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CD74P04233 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
CD74P04233 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CD74P04233 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
CD74P04233 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
CD74P04233 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CD74P04233 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
CD74P04233 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CD74P04233 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC13.6□□□□□ -0.23
CD74P04233 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
CD74P04233 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CD74P04233 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC13.6□□□□□ -0.23
CD74P04233 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CD74P04233 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CD74P04233 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CD74P04233 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
CD74P04233 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CD74P04233 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CD74P04233 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CD74P04233 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CD74P04233 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CD74P04233 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CD74P04233 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
CD74P04233 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CD74P04233 CD99-202ENST00000381180 530 ntTSL 2 BASIC13.6□□□□□ -0.23
CD74P04233 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC13.6□□□□□ -0.23
CD74P04233 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CD74P04233 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC13.6□□□□□ -0.23
CD74P04233 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
CD74P04233 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC13.6□□□□□ -0.23
CD74P04233 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC13.6□□□□□ -0.23
CD74P04233 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC13.6□□□□□ -0.23
CD74P04233 AC104819.1-201ENST00000504587 486 ntBASIC13.6□□□□□ -0.23
CD74P04233 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC13.6□□□□□ -0.23
CD74P04233 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CD74P04233 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC13.6□□□□□ -0.23
CD74P04233 MMP17-203ENST00000535004 719 ntTSL 3 BASIC13.6□□□□□ -0.23
CD74P04233 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC13.6□□□□□ -0.23
CD74P04233 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC13.6□□□□□ -0.23
CD74P04233 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC13.6□□□□□ -0.23
CD74P04233 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC13.6□□□□□ -0.23
CD74P04233 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
CD74P04233 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC13.6□□□□□ -0.23
CD74P04233 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC13.6□□□□□ -0.23
CD74P04233 AL591684.3-201ENST00000605187 298 ntBASIC13.6□□□□□ -0.23
CD74P04233 AL121956.5-201ENST00000625261 221 ntBASIC13.6□□□□□ -0.23
CD74P04233 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC13.6□□□□□ -0.23
CD74P04233 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
CD74P04233 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
CD74P04233 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
CD74P04233 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
CD74P04233 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
CD74P04233 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CD74P04233 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CD74P04233 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
CD74P04233 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CD74P04233 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CD74P04233 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
CD74P04233 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC13.6□□□□□ -0.23
CD74P04233 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CD74P04233 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
CD74P04233 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC13.6□□□□□ -0.23
CD74P04233 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CD74P04233 AC068587.6-202ENST00000641839 5619 ntBASIC13.6□□□□□ -0.23
CD74P04233 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC13.6□□□□□ -0.23
CD74P04233 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
CD74P04233 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
CD74P04233 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CD74P04233 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
CD74P04233 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
CD74P04233 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CD74P04233 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
CD74P04233 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CD74P04233 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
CD74P04233 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CD74P04233 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC13.59□□□□□ -0.23
CD74P04233 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CD74P04233 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CD74P04233 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
CD74P04233 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC13.59□□□□□ -0.23
CD74P04233 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
CD74P04233 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC13.59□□□□□ -0.23
CD74P04233 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
CD74P04233 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC13.59□□□□□ -0.23
CD74P04233 MIR1224-201ENST00000408193 85 ntBASIC13.59□□□□□ -0.23
CD74P04233 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC13.59□□□□□ -0.23
CD74P04233 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC13.59□□□□□ -0.23
CD74P04233 PPOX-219ENST00000544598 813 ntTSL 2 BASIC13.59□□□□□ -0.23
CD74P04233 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC13.59□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms