Protein–RNA interactions for Protein: O95741

CPNE6, Copine-6, humanhuman

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6O95741 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CPNE6O95741 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CPNE6O95741 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CPNE6O95741 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC15.87■□□□□ 0.13
CPNE6O95741 AC079328.2-201ENST00000561241 3354 ntBASIC15.87■□□□□ 0.13
CPNE6O95741 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CPNE6O95741 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CPNE6O95741 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC15.87■□□□□ 0.13
CPNE6O95741 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CPNE6O95741 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC15.87■□□□□ 0.13
CPNE6O95741 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC15.87■□□□□ 0.13
CPNE6O95741 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC15.87■□□□□ 0.13
CPNE6O95741 HLA-V-204ENST00000476601 1289 ntBASIC15.87■□□□□ 0.13
CPNE6O95741 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC15.87■□□□□ 0.13
CPNE6O95741 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC15.87■□□□□ 0.13
CPNE6O95741 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC15.87■□□□□ 0.13
CPNE6O95741 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC15.87■□□□□ 0.13
CPNE6O95741 SPDYE12P-201ENST00000618416 771 ntBASIC15.87■□□□□ 0.13
CPNE6O95741 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CPNE6O95741 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
CPNE6O95741 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CPNE6O95741 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CPNE6O95741 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
CPNE6O95741 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CPNE6O95741 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CPNE6O95741 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC15.87■□□□□ 0.13
CPNE6O95741 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC15.87■□□□□ 0.13
CPNE6O95741 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CPNE6O95741 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC15.87■□□□□ 0.13
CPNE6O95741 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CPNE6O95741 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC15.86■□□□□ 0.13
CPNE6O95741 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CPNE6O95741 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC15.86■□□□□ 0.13
CPNE6O95741 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC15.86■□□□□ 0.13
CPNE6O95741 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CPNE6O95741 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CPNE6O95741 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CPNE6O95741 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CPNE6O95741 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CPNE6O95741 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CPNE6O95741 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
CPNE6O95741 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC15.86■□□□□ 0.13
CPNE6O95741 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CPNE6O95741 COPE-202ENST00000349893 948 ntTSL 2 BASIC15.86■□□□□ 0.13
CPNE6O95741 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
CPNE6O95741 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC15.86■□□□□ 0.13
CPNE6O95741 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC15.86■□□□□ 0.13
CPNE6O95741 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC15.86■□□□□ 0.13
CPNE6O95741 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC15.86■□□□□ 0.13
CPNE6O95741 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC15.86■□□□□ 0.13
CPNE6O95741 COX11-202ENST00000571584 1108 ntTSL 2 BASIC15.86■□□□□ 0.13
CPNE6O95741 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC15.86■□□□□ 0.13
CPNE6O95741 AC009118.2-201ENST00000613275 655 ntBASIC15.86■□□□□ 0.13
CPNE6O95741 AL138828.2-201ENST00000615812 383 ntBASIC15.86■□□□□ 0.13
CPNE6O95741 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CPNE6O95741 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC15.86■□□□□ 0.13
CPNE6O95741 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CPNE6O95741 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CPNE6O95741 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
CPNE6O95741 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC15.86■□□□□ 0.13
CPNE6O95741 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC15.86■□□□□ 0.13
CPNE6O95741 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC15.86■□□□□ 0.13
CPNE6O95741 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC15.85■□□□□ 0.13
CPNE6O95741 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
CPNE6O95741 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CPNE6O95741 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CPNE6O95741 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC15.85■□□□□ 0.13
CPNE6O95741 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
CPNE6O95741 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
CPNE6O95741 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CPNE6O95741 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CPNE6O95741 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
CPNE6O95741 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CPNE6O95741 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CPNE6O95741 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CPNE6O95741 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CPNE6O95741 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CPNE6O95741 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CPNE6O95741 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CPNE6O95741 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
CPNE6O95741 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
CPNE6O95741 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CPNE6O95741 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC15.85■□□□□ 0.13
CPNE6O95741 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CPNE6O95741 HNRNPA3P1-201ENST00000401429 1139 ntBASIC15.85■□□□□ 0.13
CPNE6O95741 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CPNE6O95741 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC15.85■□□□□ 0.13
CPNE6O95741 TSSK5P-201ENST00000423978 907 ntBASIC15.85■□□□□ 0.13
CPNE6O95741 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CPNE6O95741 HNRNPA3P5-201ENST00000455201 833 ntBASIC15.85■□□□□ 0.13
CPNE6O95741 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CPNE6O95741 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC15.85■□□□□ 0.13
CPNE6O95741 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CPNE6O95741 AL139011.1-202ENST00000642063 584 ntBASIC15.85■□□□□ 0.13
CPNE6O95741 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
CPNE6O95741 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC15.85■□□□□ 0.13
CPNE6O95741 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CPNE6O95741 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC15.85■□□□□ 0.13
CPNE6O95741 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CPNE6O95741 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms