Protein–RNA interactions for Protein: O76031

CLPX, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPXO76031 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CLPXO76031 OS9-207ENST00000439210 1946 ntTSL 2 BASIC14.74□□□□□ -0.05
CLPXO76031 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC14.74□□□□□ -0.05
CLPXO76031 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CLPXO76031 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CLPXO76031 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CLPXO76031 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CLPXO76031 AC006277.1-201ENST00000624348 1610 ntBASIC14.74□□□□□ -0.05
CLPXO76031 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CLPXO76031 AC117489.1-201ENST00000625169 3217 ntBASIC14.74□□□□□ -0.05
CLPXO76031 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC14.74□□□□□ -0.05
CLPXO76031 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC14.74□□□□□ -0.05
CLPXO76031 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CLPXO76031 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
CLPXO76031 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CLPXO76031 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CLPXO76031 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CLPXO76031 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CLPXO76031 AC010327.5-201ENST00000586923 3061 ntBASIC14.74□□□□□ -0.05
CLPXO76031 SBF1P1-201ENST00000444527 5631 ntBASIC14.74□□□□□ -0.05
CLPXO76031 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
CLPXO76031 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CLPXO76031 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CLPXO76031 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CLPXO76031 MDH2-205ENST00000461263 648 ntTSL 2 BASIC14.74□□□□□ -0.05
CLPXO76031 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC14.74□□□□□ -0.05
CLPXO76031 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC14.74□□□□□ -0.05
CLPXO76031 SDHD-206ENST00000528182 754 ntTSL 3 BASIC14.74□□□□□ -0.05
CLPXO76031 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC14.74□□□□□ -0.05
CLPXO76031 PRELID1P1-202ENST00000567272 903 ntBASIC14.74□□□□□ -0.05
CLPXO76031 IRF5-214ENST00000613821 595 ntTSL 5 BASIC14.74□□□□□ -0.05
CLPXO76031 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC14.74□□□□□ -0.05
CLPXO76031 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
CLPXO76031 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC14.74□□□□□ -0.05
CLPXO76031 TBC1D3P5-201ENST00000579401 1545 ntBASIC14.74□□□□□ -0.05
CLPXO76031 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CLPXO76031 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CLPXO76031 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
CLPXO76031 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CLPXO76031 AC091951.1-201ENST00000512854 2465 ntBASIC14.74□□□□□ -0.05
CLPXO76031 AP003680.1-201ENST00000598970 3660 ntBASIC14.74□□□□□ -0.05
CLPXO76031 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC14.74□□□□□ -0.05
CLPXO76031 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CLPXO76031 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CLPXO76031 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CLPXO76031 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CLPXO76031 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLPXO76031 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC14.73□□□□□ -0.05
CLPXO76031 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLPXO76031 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
CLPXO76031 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLPXO76031 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLPXO76031 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
CLPXO76031 AC097374.2-201ENST00000618617 1306 ntBASIC14.73□□□□□ -0.05
CLPXO76031 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
CLPXO76031 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLPXO76031 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLPXO76031 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLPXO76031 PARN-202ENST00000420015 2360 ntTSL 2 BASIC14.73□□□□□ -0.05
CLPXO76031 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLPXO76031 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLPXO76031 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLPXO76031 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CLPXO76031 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC14.73□□□□□ -0.05
CLPXO76031 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
CLPXO76031 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CLPXO76031 POU5F1P6-201ENST00000466990 990 ntBASIC14.73□□□□□ -0.05
CLPXO76031 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
CLPXO76031 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC14.73□□□□□ -0.05
CLPXO76031 AC090616.6-201ENST00000582640 721 ntBASIC14.73□□□□□ -0.05
CLPXO76031 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLPXO76031 AL592071.1-201ENST00000611956 408 ntBASIC14.73□□□□□ -0.05
CLPXO76031 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CLPXO76031 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CLPXO76031 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC14.73□□□□□ -0.05
CLPXO76031 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC14.73□□□□□ -0.05
CLPXO76031 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC14.73□□□□□ -0.05
CLPXO76031 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC14.73□□□□□ -0.05
CLPXO76031 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC14.73□□□□□ -0.05
CLPXO76031 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC14.73□□□□□ -0.05
CLPXO76031 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC14.73□□□□□ -0.05
CLPXO76031 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLPXO76031 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLPXO76031 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC14.73□□□□□ -0.05
CLPXO76031 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLPXO76031 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
CLPXO76031 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLPXO76031 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLPXO76031 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
CLPXO76031 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLPXO76031 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLPXO76031 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CLPXO76031 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC14.73□□□□□ -0.05
CLPXO76031 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC14.73□□□□□ -0.05
CLPXO76031 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC14.72□□□□□ -0.05
CLPXO76031 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CLPXO76031 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CLPXO76031 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CLPXO76031 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CLPXO76031 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 64.1 ms