Protein–RNA interactions for Protein: O75489

NDUFS3, NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3O75489 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
NDUFS3O75489 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
NDUFS3O75489 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
NDUFS3O75489 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC16.13■□□□□ 0.17
NDUFS3O75489 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NDUFS3O75489 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NDUFS3O75489 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
NDUFS3O75489 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
NDUFS3O75489 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NDUFS3O75489 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC16.12■□□□□ 0.17
NDUFS3O75489 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
NDUFS3O75489 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC16.12■□□□□ 0.17
NDUFS3O75489 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
NDUFS3O75489 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
NDUFS3O75489 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
NDUFS3O75489 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
NDUFS3O75489 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC16.12■□□□□ 0.17
NDUFS3O75489 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NDUFS3O75489 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
NDUFS3O75489 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NDUFS3O75489 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC16.12■□□□□ 0.17
NDUFS3O75489 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NDUFS3O75489 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.12■□□□□ 0.17
NDUFS3O75489 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC16.12■□□□□ 0.17
NDUFS3O75489 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC16.12■□□□□ 0.17
NDUFS3O75489 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NDUFS3O75489 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC16.12■□□□□ 0.17
NDUFS3O75489 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC16.12■□□□□ 0.17
NDUFS3O75489 SPCS2P4-201ENST00000436160 681 ntBASIC16.12■□□□□ 0.17
NDUFS3O75489 CEND1P1-201ENST00000451006 455 ntBASIC16.12■□□□□ 0.17
NDUFS3O75489 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC16.12■□□□□ 0.17
NDUFS3O75489 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC16.12■□□□□ 0.17
NDUFS3O75489 RNF34-208ENST00000555076 593 ntTSL 3 BASIC16.12■□□□□ 0.17
NDUFS3O75489 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC16.12■□□□□ 0.17
NDUFS3O75489 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC16.12■□□□□ 0.17
NDUFS3O75489 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC16.12■□□□□ 0.17
NDUFS3O75489 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
NDUFS3O75489 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC16.12■□□□□ 0.17
NDUFS3O75489 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
NDUFS3O75489 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NDUFS3O75489 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NDUFS3O75489 ACE-203ENST00000413513 2237 ntTSL 2 BASIC16.12■□□□□ 0.17
NDUFS3O75489 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC16.12■□□□□ 0.17
NDUFS3O75489 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC16.12■□□□□ 0.17
NDUFS3O75489 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
NDUFS3O75489 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
NDUFS3O75489 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
NDUFS3O75489 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC16.12■□□□□ 0.17
NDUFS3O75489 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.12■□□□□ 0.17
NDUFS3O75489 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
NDUFS3O75489 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
NDUFS3O75489 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
NDUFS3O75489 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
NDUFS3O75489 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC16.11■□□□□ 0.17
NDUFS3O75489 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.11■□□□□ 0.17
NDUFS3O75489 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC16.11■□□□□ 0.17
NDUFS3O75489 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NDUFS3O75489 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NDUFS3O75489 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC16.11■□□□□ 0.17
NDUFS3O75489 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC16.11■□□□□ 0.17
NDUFS3O75489 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NDUFS3O75489 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC16.11■□□□□ 0.17
NDUFS3O75489 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NDUFS3O75489 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NDUFS3O75489 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NDUFS3O75489 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC16.11■□□□□ 0.17
NDUFS3O75489 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC16.11■□□□□ 0.17
NDUFS3O75489 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC16.11■□□□□ 0.17
NDUFS3O75489 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC16.11■□□□□ 0.17
NDUFS3O75489 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
NDUFS3O75489 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
NDUFS3O75489 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC16.11■□□□□ 0.17
NDUFS3O75489 KRT8P23-201ENST00000560090 1207 ntBASIC16.11■□□□□ 0.17
NDUFS3O75489 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC16.11■□□□□ 0.17
NDUFS3O75489 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC16.11■□□□□ 0.17
NDUFS3O75489 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
NDUFS3O75489 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NDUFS3O75489 ELL2P1-201ENST00000413990 1906 ntBASIC16.11■□□□□ 0.17
NDUFS3O75489 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NDUFS3O75489 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NDUFS3O75489 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC16.11■□□□□ 0.17
NDUFS3O75489 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
NDUFS3O75489 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
NDUFS3O75489 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.11■□□□□ 0.17
NDUFS3O75489 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
NDUFS3O75489 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
NDUFS3O75489 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NDUFS3O75489 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
NDUFS3O75489 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
NDUFS3O75489 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NDUFS3O75489 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
NDUFS3O75489 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
NDUFS3O75489 UXT-AS1-201ENST00000590504 1525 ntBASIC16.1■□□□□ 0.17
NDUFS3O75489 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
NDUFS3O75489 PRAL-201ENST00000624952 3286 ntBASIC16.1■□□□□ 0.17
NDUFS3O75489 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NDUFS3O75489 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NDUFS3O75489 AC008677.1-201ENST00000519230 1561 ntBASIC16.1■□□□□ 0.17
NDUFS3O75489 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC16.1■□□□□ 0.17
NDUFS3O75489 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms