Protein–RNA interactions for Protein: O60811

PRAMEF2, PRAME family member 2, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF2O60811 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PRAMEF2O60811 AC142381.1-201ENST00000426099 345 ntBASIC15.19■□□□□ 0.02
PRAMEF2O60811 HNRNPA1P40-201ENST00000426371 1278 ntBASIC15.19■□□□□ 0.02
PRAMEF2O60811 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
PRAMEF2O60811 COX20P2-201ENST00000452636 358 ntBASIC15.19■□□□□ 0.02
PRAMEF2O60811 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC15.19■□□□□ 0.02
PRAMEF2O60811 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC15.19■□□□□ 0.02
PRAMEF2O60811 AC069120.2-201ENST00000524091 540 ntBASIC15.19■□□□□ 0.02
PRAMEF2O60811 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PRAMEF2O60811 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC15.19■□□□□ 0.02
PRAMEF2O60811 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PRAMEF2O60811 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC15.19■□□□□ 0.02
PRAMEF2O60811 AL158211.3-201ENST00000607385 239 ntBASIC15.19■□□□□ 0.02
PRAMEF2O60811 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PRAMEF2O60811 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC15.19■□□□□ 0.02
PRAMEF2O60811 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PRAMEF2O60811 SP100-205ENST00000409824 1802 ntTSL 5 BASIC15.19■□□□□ 0.02
PRAMEF2O60811 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
PRAMEF2O60811 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
PRAMEF2O60811 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
PRAMEF2O60811 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
PRAMEF2O60811 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
PRAMEF2O60811 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PRAMEF2O60811 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
PRAMEF2O60811 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
PRAMEF2O60811 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC15.19■□□□□ 0.02
PRAMEF2O60811 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PRAMEF2O60811 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
PRAMEF2O60811 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PRAMEF2O60811 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
PRAMEF2O60811 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC15.18■□□□□ 0.02
PRAMEF2O60811 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC15.18■□□□□ 0.02
PRAMEF2O60811 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC15.18■□□□□ 0.02
PRAMEF2O60811 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PRAMEF2O60811 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
PRAMEF2O60811 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PRAMEF2O60811 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PRAMEF2O60811 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC15.18■□□□□ 0.02
PRAMEF2O60811 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC15.18■□□□□ 0.02
PRAMEF2O60811 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PRAMEF2O60811 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC15.18■□□□□ 0.02
PRAMEF2O60811 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PRAMEF2O60811 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
PRAMEF2O60811 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PRAMEF2O60811 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC15.18■□□□□ 0.02
PRAMEF2O60811 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PRAMEF2O60811 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
PRAMEF2O60811 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PRAMEF2O60811 CD81-202ENST00000381036 880 ntTSL 3 BASIC15.18■□□□□ 0.02
PRAMEF2O60811 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC15.18■□□□□ 0.02
PRAMEF2O60811 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
PRAMEF2O60811 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PRAMEF2O60811 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PRAMEF2O60811 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC15.18■□□□□ 0.02
PRAMEF2O60811 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC15.18■□□□□ 0.02
PRAMEF2O60811 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PRAMEF2O60811 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC15.18■□□□□ 0.02
PRAMEF2O60811 NAA60-208ENST00000570819 833 ntTSL 2 BASIC15.18■□□□□ 0.02
PRAMEF2O60811 AC024267.1-201ENST00000582320 895 ntBASIC15.18■□□□□ 0.02
PRAMEF2O60811 AC138761.1-201ENST00000584393 385 ntBASIC15.18■□□□□ 0.02
PRAMEF2O60811 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC15.18■□□□□ 0.02
PRAMEF2O60811 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC15.18■□□□□ 0.02
PRAMEF2O60811 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PRAMEF2O60811 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC15.18■□□□□ 0.02
PRAMEF2O60811 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PRAMEF2O60811 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
PRAMEF2O60811 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC15.18■□□□□ 0.02
PRAMEF2O60811 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
PRAMEF2O60811 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
PRAMEF2O60811 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC15.18■□□□□ 0.02
PRAMEF2O60811 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC15.18■□□□□ 0.02
PRAMEF2O60811 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PRAMEF2O60811 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
PRAMEF2O60811 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
PRAMEF2O60811 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC15.17■□□□□ 0.02
PRAMEF2O60811 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
PRAMEF2O60811 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC15.17■□□□□ 0.02
PRAMEF2O60811 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PRAMEF2O60811 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC15.17■□□□□ 0.02
PRAMEF2O60811 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PRAMEF2O60811 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PRAMEF2O60811 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC15.17■□□□□ 0.02
PRAMEF2O60811 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
PRAMEF2O60811 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
PRAMEF2O60811 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
PRAMEF2O60811 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
PRAMEF2O60811 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PRAMEF2O60811 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC15.17■□□□□ 0.02
PRAMEF2O60811 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC15.17■□□□□ 0.02
PRAMEF2O60811 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC15.17■□□□□ 0.02
PRAMEF2O60811 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC15.17■□□□□ 0.02
PRAMEF2O60811 PPP6R2P1-201ENST00000450880 1275 ntBASIC15.17■□□□□ 0.02
PRAMEF2O60811 AC245100.5-201ENST00000452108 331 ntBASIC15.17■□□□□ 0.02
PRAMEF2O60811 AL512638.1-201ENST00000457493 794 ntBASIC15.17■□□□□ 0.02
PRAMEF2O60811 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PRAMEF2O60811 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC15.17■□□□□ 0.02
PRAMEF2O60811 MIR4453-201ENST00000584019 89 ntBASIC15.17■□□□□ 0.02
PRAMEF2O60811 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC15.17■□□□□ 0.02
PRAMEF2O60811 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PRAMEF2O60811 AL390754.1-201ENST00000619088 582 ntBASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms