Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC16.01■□□□□ 0.15
PCDHGA12O60330 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGA12O60330 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGA12O60330 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGA12O60330 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGA12O60330 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGA12O60330 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC16.01■□□□□ 0.15
PCDHGA12O60330 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGA12O60330 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGA12O60330 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGA12O60330 KRT8P39-201ENST00000396270 1433 ntBASIC16.01■□□□□ 0.15
PCDHGA12O60330 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC16.01■□□□□ 0.15
PCDHGA12O60330 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGA12O60330 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
PCDHGA12O60330 FER1L4-210ENST00000615531 5998 ntBASIC16.01■□□□□ 0.15
PCDHGA12O60330 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGA12O60330 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGA12O60330 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.01■□□□□ 0.15
PCDHGA12O60330 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC16■□□□□ 0.15
PCDHGA12O60330 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16■□□□□ 0.15
PCDHGA12O60330 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16■□□□□ 0.15
PCDHGA12O60330 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC16■□□□□ 0.15
PCDHGA12O60330 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCDHGA12O60330 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCDHGA12O60330 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16■□□□□ 0.15
PCDHGA12O60330 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC16■□□□□ 0.15
PCDHGA12O60330 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
PCDHGA12O60330 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC16■□□□□ 0.15
PCDHGA12O60330 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC16■□□□□ 0.15
PCDHGA12O60330 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCDHGA12O60330 BANP-204ENST00000393208 2283 ntTSL 2 BASIC16■□□□□ 0.15
PCDHGA12O60330 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCDHGA12O60330 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC16■□□□□ 0.15
PCDHGA12O60330 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCDHGA12O60330 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCDHGA12O60330 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCDHGA12O60330 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCDHGA12O60330 SPDYE19P-201ENST00000338590 713 ntBASIC16■□□□□ 0.15
PCDHGA12O60330 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC16■□□□□ 0.15
PCDHGA12O60330 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC16■□□□□ 0.15
PCDHGA12O60330 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC16■□□□□ 0.15
PCDHGA12O60330 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
PCDHGA12O60330 OSM-203ENST00000403463 464 ntTSL 3 BASIC16■□□□□ 0.15
PCDHGA12O60330 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC16■□□□□ 0.15
PCDHGA12O60330 RASL12-203ENST00000434605 982 ntTSL 2 BASIC16■□□□□ 0.15
PCDHGA12O60330 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC16■□□□□ 0.15
PCDHGA12O60330 AC114501.2-201ENST00000439631 535 ntBASIC16■□□□□ 0.15
PCDHGA12O60330 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC16■□□□□ 0.15
PCDHGA12O60330 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
PCDHGA12O60330 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC16■□□□□ 0.15
PCDHGA12O60330 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC16■□□□□ 0.15
PCDHGA12O60330 HILS1-202ENST00000545329 423 ntBASIC16■□□□□ 0.15
PCDHGA12O60330 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC16■□□□□ 0.15
PCDHGA12O60330 AC017083.2-201ENST00000608069 979 ntBASIC16■□□□□ 0.15
PCDHGA12O60330 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC16■□□□□ 0.15
PCDHGA12O60330 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC16■□□□□ 0.15
PCDHGA12O60330 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC16■□□□□ 0.15
PCDHGA12O60330 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16■□□□□ 0.15
PCDHGA12O60330 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
PCDHGA12O60330 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC16■□□□□ 0.15
PCDHGA12O60330 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
PCDHGA12O60330 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16■□□□□ 0.15
PCDHGA12O60330 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC16■□□□□ 0.15
PCDHGA12O60330 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC16■□□□□ 0.15
PCDHGA12O60330 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16■□□□□ 0.15
PCDHGA12O60330 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16■□□□□ 0.15
PCDHGA12O60330 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCDHGA12O60330 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC16■□□□□ 0.15
PCDHGA12O60330 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCDHGA12O60330 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC15.99■□□□□ 0.15
PCDHGA12O60330 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC15.99■□□□□ 0.15
PCDHGA12O60330 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
PCDHGA12O60330 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC15.99■□□□□ 0.15
PCDHGA12O60330 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
PCDHGA12O60330 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC15.99■□□□□ 0.15
PCDHGA12O60330 AC092068.3-201ENST00000587894 2016 ntBASIC15.99■□□□□ 0.15
PCDHGA12O60330 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PCDHGA12O60330 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PCDHGA12O60330 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PCDHGA12O60330 AL671710.1-201ENST00000610245 2349 ntBASIC15.99■□□□□ 0.15
PCDHGA12O60330 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCDHGA12O60330 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCDHGA12O60330 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC15.99■□□□□ 0.15
PCDHGA12O60330 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCDHGA12O60330 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCDHGA12O60330 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC15.99■□□□□ 0.15
PCDHGA12O60330 VMO1-203ENST00000416307 712 ntTSL 2 BASIC15.99■□□□□ 0.15
PCDHGA12O60330 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC15.99■□□□□ 0.15
PCDHGA12O60330 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC15.99■□□□□ 0.15
PCDHGA12O60330 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC15.99■□□□□ 0.15
PCDHGA12O60330 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC15.99■□□□□ 0.15
PCDHGA12O60330 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC15.99■□□□□ 0.15
PCDHGA12O60330 AL512361.1-201ENST00000554200 418 ntBASIC15.99■□□□□ 0.15
PCDHGA12O60330 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC15.99■□□□□ 0.15
PCDHGA12O60330 AC024267.1-201ENST00000582320 895 ntBASIC15.99■□□□□ 0.15
PCDHGA12O60330 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC15.99■□□□□ 0.15
PCDHGA12O60330 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCDHGA12O60330 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
PCDHGA12O60330 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCDHGA12O60330 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms