Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 LITAF-214ENST00000574703 486 ntTSL 2 BASIC15.02■□□□□ -0
PRKNO60260 NAA38-207ENST00000576861 556 ntTSL 3 BASIC15.02■□□□□ -0
PRKNO60260 MIR4321-201ENST00000592276 80 ntBASIC15.02■□□□□ -0
PRKNO60260 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC15.02■□□□□ -0
PRKNO60260 AL158211.3-201ENST00000607385 239 ntBASIC15.02■□□□□ -0
PRKNO60260 AL138828.2-201ENST00000615812 383 ntBASIC15.02■□□□□ -0
PRKNO60260 AL390754.1-201ENST00000619088 582 ntBASIC15.02■□□□□ -0
PRKNO60260 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
PRKNO60260 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
PRKNO60260 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
PRKNO60260 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC15.02□□□□□ -0.01
PRKNO60260 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PRKNO60260 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PRKNO60260 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
PRKNO60260 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PRKNO60260 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC15.02□□□□□ -0.01
PRKNO60260 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
PRKNO60260 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PRKNO60260 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
PRKNO60260 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PRKNO60260 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
PRKNO60260 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC15.02□□□□□ -0.01
PRKNO60260 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PRKNO60260 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
PRKNO60260 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC15.01□□□□□ -0.01
PRKNO60260 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
PRKNO60260 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PRKNO60260 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PRKNO60260 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PRKNO60260 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC15.01□□□□□ -0.01
PRKNO60260 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
PRKNO60260 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PRKNO60260 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PRKNO60260 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
PRKNO60260 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PRKNO60260 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PRKNO60260 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
PRKNO60260 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
PRKNO60260 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PRKNO60260 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
PRKNO60260 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PRKNO60260 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PRKNO60260 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC15.01□□□□□ -0.01
PRKNO60260 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PRKNO60260 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PRKNO60260 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC15.01□□□□□ -0.01
PRKNO60260 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC15.01□□□□□ -0.01
PRKNO60260 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
PRKNO60260 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PRKNO60260 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PRKNO60260 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC15.01□□□□□ -0.01
PRKNO60260 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC15.01□□□□□ -0.01
PRKNO60260 AC073592.8-201ENST00000624126 511 ntBASIC15.01□□□□□ -0.01
PRKNO60260 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PRKNO60260 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
PRKNO60260 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
PRKNO60260 F11R-206ENST00000621309 4770 ntTSL 5 BASIC15.01□□□□□ -0.01
PRKNO60260 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PRKNO60260 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PRKNO60260 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC15.01□□□□□ -0.01
PRKNO60260 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PRKNO60260 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PRKNO60260 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
PRKNO60260 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
PRKNO60260 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PRKNO60260 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PRKNO60260 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PRKNO60260 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PRKNO60260 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
PRKNO60260 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PRKNO60260 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
PRKNO60260 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
PRKNO60260 AL136982.4-201ENST00000437689 1740 ntBASIC15□□□□□ -0.01
PRKNO60260 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
PRKNO60260 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PRKNO60260 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PRKNO60260 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PRKNO60260 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PRKNO60260 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC15□□□□□ -0.01
PRKNO60260 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC15□□□□□ -0.01
PRKNO60260 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC15□□□□□ -0.01
PRKNO60260 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
PRKNO60260 SUPT20HL2-201ENST00000486479 2409 ntBASIC15□□□□□ -0.01
PRKNO60260 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC15□□□□□ -0.01
PRKNO60260 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC15□□□□□ -0.01
PRKNO60260 RBM39-205ENST00000397370 612 ntTSL 2 BASIC15□□□□□ -0.01
PRKNO60260 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC15□□□□□ -0.01
PRKNO60260 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
PRKNO60260 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC15□□□□□ -0.01
PRKNO60260 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC15□□□□□ -0.01
PRKNO60260 AC027369.6-201ENST00000525520 931 ntBASIC15□□□□□ -0.01
PRKNO60260 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC15□□□□□ -0.01
PRKNO60260 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC15□□□□□ -0.01
PRKNO60260 SPCS2P1-201ENST00000561636 679 ntBASIC15□□□□□ -0.01
PRKNO60260 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC15□□□□□ -0.01
PRKNO60260 INO80C-206ENST00000586489 594 ntTSL 3 BASIC15□□□□□ -0.01
PRKNO60260 AL365330.1-201ENST00000607459 531 ntBASIC15□□□□□ -0.01
PRKNO60260 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC15□□□□□ -0.01
PRKNO60260 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC15□□□□□ -0.01
PRKNO60260 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms