Protein–RNA interactions for Protein: O43761

SYNGR3, Synaptogyrin-3, humanhuman

Predictions only

Length 229 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3O43761 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SYNGR3O43761 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC14.07□□□□□ -0.16
SYNGR3O43761 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SYNGR3O43761 ABR-203ENST00000536794 2213 ntTSL 2 BASIC14.07□□□□□ -0.16
SYNGR3O43761 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SYNGR3O43761 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
SYNGR3O43761 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC14.07□□□□□ -0.16
SYNGR3O43761 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SYNGR3O43761 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SYNGR3O43761 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SYNGR3O43761 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
SYNGR3O43761 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SYNGR3O43761 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SYNGR3O43761 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC14.07□□□□□ -0.16
SYNGR3O43761 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
SYNGR3O43761 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
SYNGR3O43761 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
SYNGR3O43761 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SYNGR3O43761 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SYNGR3O43761 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SYNGR3O43761 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
SYNGR3O43761 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SYNGR3O43761 SPDYE7P-202ENST00000420373 878 ntBASIC14.07□□□□□ -0.16
SYNGR3O43761 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
SYNGR3O43761 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC14.07□□□□□ -0.16
SYNGR3O43761 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC14.07□□□□□ -0.16
SYNGR3O43761 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC14.07□□□□□ -0.16
SYNGR3O43761 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC14.07□□□□□ -0.16
SYNGR3O43761 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC14.07□□□□□ -0.16
SYNGR3O43761 AC015911.4-201ENST00000588022 1070 ntBASIC14.07□□□□□ -0.16
SYNGR3O43761 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC14.07□□□□□ -0.16
SYNGR3O43761 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC14.07□□□□□ -0.16
SYNGR3O43761 AP3S2-216ENST00000617003 1561 ntBASIC14.07□□□□□ -0.16
SYNGR3O43761 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SYNGR3O43761 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC14.07□□□□□ -0.16
SYNGR3O43761 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC14.07□□□□□ -0.16
SYNGR3O43761 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC14.07□□□□□ -0.16
SYNGR3O43761 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC14.07□□□□□ -0.16
SYNGR3O43761 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SYNGR3O43761 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SYNGR3O43761 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SYNGR3O43761 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SYNGR3O43761 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SYNGR3O43761 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
SYNGR3O43761 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SYNGR3O43761 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SYNGR3O43761 AC134407.2-201ENST00000625089 1978 ntBASIC14.07□□□□□ -0.16
SYNGR3O43761 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC14.07□□□□□ -0.16
SYNGR3O43761 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC14.07□□□□□ -0.16
SYNGR3O43761 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC14.07□□□□□ -0.16
SYNGR3O43761 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC14.07□□□□□ -0.16
SYNGR3O43761 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
SYNGR3O43761 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SYNGR3O43761 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SYNGR3O43761 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC14.06□□□□□ -0.16
SYNGR3O43761 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
SYNGR3O43761 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SYNGR3O43761 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SYNGR3O43761 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SYNGR3O43761 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
SYNGR3O43761 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
SYNGR3O43761 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC14.06□□□□□ -0.16
SYNGR3O43761 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SYNGR3O43761 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SYNGR3O43761 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC14.06□□□□□ -0.16
SYNGR3O43761 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SYNGR3O43761 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
SYNGR3O43761 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC14.06□□□□□ -0.16
SYNGR3O43761 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SYNGR3O43761 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SYNGR3O43761 PAUPAR-201ENST00000630360 2965 ntBASIC14.06□□□□□ -0.16
SYNGR3O43761 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC14.06□□□□□ -0.16
SYNGR3O43761 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SYNGR3O43761 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SYNGR3O43761 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
SYNGR3O43761 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
SYNGR3O43761 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SYNGR3O43761 GPS2P2-201ENST00000430745 888 ntBASIC14.06□□□□□ -0.16
SYNGR3O43761 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC14.06□□□□□ -0.16
SYNGR3O43761 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC14.06□□□□□ -0.16
SYNGR3O43761 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC14.06□□□□□ -0.16
SYNGR3O43761 SLBP-205ENST00000488267 987 ntTSL 2 BASIC14.06□□□□□ -0.16
SYNGR3O43761 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC14.06□□□□□ -0.16
SYNGR3O43761 ALG1L8P-201ENST00000533887 760 ntBASIC14.06□□□□□ -0.16
SYNGR3O43761 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC14.06□□□□□ -0.16
SYNGR3O43761 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC14.06□□□□□ -0.16
SYNGR3O43761 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC14.06□□□□□ -0.16
SYNGR3O43761 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SYNGR3O43761 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC14.06□□□□□ -0.16
SYNGR3O43761 AL355385.1-201ENST00000606123 409 ntBASIC14.06□□□□□ -0.16
SYNGR3O43761 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC14.06□□□□□ -0.16
SYNGR3O43761 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
SYNGR3O43761 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC14.06□□□□□ -0.16
SYNGR3O43761 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SYNGR3O43761 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SYNGR3O43761 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC14.06□□□□□ -0.16
SYNGR3O43761 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
SYNGR3O43761 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SYNGR3O43761 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SYNGR3O43761 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms