Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
CHKB-CPT1BH3BT56 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
CHKB-CPT1BH3BT56 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
CHKB-CPT1BH3BT56 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
CHKB-CPT1BH3BT56 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC8.93□□□□□ -0.98
CHKB-CPT1BH3BT56 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC8.93□□□□□ -0.98
CHKB-CPT1BH3BT56 CEP350-202ENST00000367607 13491 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
CHKB-CPT1BH3BT56 MBLAC2-202ENST00000514906 1936 ntBASIC8.93□□□□□ -0.98
CHKB-CPT1BH3BT56 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC8.93□□□□□ -0.98
CHKB-CPT1BH3BT56 LCK-206ENST00000373564 2137 ntTSL 5 BASIC8.93□□□□□ -0.98
CHKB-CPT1BH3BT56 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC8.93□□□□□ -0.98
CHKB-CPT1BH3BT56 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC8.93□□□□□ -0.98
CHKB-CPT1BH3BT56 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
CHKB-CPT1BH3BT56 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC8.93□□□□□ -0.98
CHKB-CPT1BH3BT56 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC8.93□□□□□ -0.98
CHKB-CPT1BH3BT56 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC8.93□□□□□ -0.98
CHKB-CPT1BH3BT56 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC8.93□□□□□ -0.98
CHKB-CPT1BH3BT56 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
CHKB-CPT1BH3BT56 BRD4-201ENST00000263377 7169 ntAPPRIS P3 TSL 1 (best) BASIC8.93□□□□□ -0.98
CHKB-CPT1BH3BT56 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
CHKB-CPT1BH3BT56 COCH-203ENST00000460581 2688 ntTSL 2 BASIC8.93□□□□□ -0.98
CHKB-CPT1BH3BT56 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC8.93□□□□□ -0.98
CHKB-CPT1BH3BT56 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
CHKB-CPT1BH3BT56 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC8.93□□□□□ -0.98
CHKB-CPT1BH3BT56 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
CHKB-CPT1BH3BT56 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
CHKB-CPT1BH3BT56 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
CHKB-CPT1BH3BT56 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
CHKB-CPT1BH3BT56 STXBP6-202ENST00000396700 4021 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
CHKB-CPT1BH3BT56 KCND3-203ENST00000369697 7396 ntAPPRIS ALT1 TSL 1 (best) BASIC8.93□□□□□ -0.98
CHKB-CPT1BH3BT56 AGAP1-212ENST00000614409 9932 ntTSL 5 BASIC8.93□□□□□ -0.98
CHKB-CPT1BH3BT56 AC010422.6-201ENST00000593682 5857 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
CHKB-CPT1BH3BT56 MORC2-202ENST00000397641 5181 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
CHKB-CPT1BH3BT56 PNPLA7-202ENST00000406427 4806 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
CHKB-CPT1BH3BT56 KCNAB2-202ENST00000341524 4207 ntAPPRIS P4 TSL 1 (best) BASIC8.92□□□□□ -0.98
CHKB-CPT1BH3BT56 CTNNB1-201ENST00000349496 3737 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
CHKB-CPT1BH3BT56 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC8.92□□□□□ -0.98
CHKB-CPT1BH3BT56 RBSN-207ENST00000476527 3005 ntAPPRIS P1 TSL 2 BASIC8.92□□□□□ -0.98
CHKB-CPT1BH3BT56 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
CHKB-CPT1BH3BT56 BAIAP2-202ENST00000321300 2879 ntAPPRIS P4 TSL 1 (best) BASIC8.92□□□□□ -0.98
CHKB-CPT1BH3BT56 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
CHKB-CPT1BH3BT56 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC8.92□□□□□ -0.98
CHKB-CPT1BH3BT56 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC8.92□□□□□ -0.98
CHKB-CPT1BH3BT56 PAX6-245ENST00000638914 7300 ntAPPRIS ALT1 TSL 1 (best) BASIC8.92□□□□□ -0.98
CHKB-CPT1BH3BT56 C12orf43-202ENST00000445832 2397 ntAPPRIS ALT2 TSL 5 BASIC8.92□□□□□ -0.98
CHKB-CPT1BH3BT56 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC8.92□□□□□ -0.98
CHKB-CPT1BH3BT56 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC8.92□□□□□ -0.98
CHKB-CPT1BH3BT56 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC8.92□□□□□ -0.98
CHKB-CPT1BH3BT56 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC8.92□□□□□ -0.98
CHKB-CPT1BH3BT56 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC8.92□□□□□ -0.98
CHKB-CPT1BH3BT56 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC8.92□□□□□ -0.98
CHKB-CPT1BH3BT56 CD22-209ENST00000594250 2107 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
CHKB-CPT1BH3BT56 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC8.92□□□□□ -0.98
CHKB-CPT1BH3BT56 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC8.92□□□□□ -0.98
CHKB-CPT1BH3BT56 MYT1-203ENST00000536311 5614 ntAPPRIS ALT2 TSL 5 BASIC8.92□□□□□ -0.98
CHKB-CPT1BH3BT56 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
CHKB-CPT1BH3BT56 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
CHKB-CPT1BH3BT56 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
CHKB-CPT1BH3BT56 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC8.92□□□□□ -0.98
CHKB-CPT1BH3BT56 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC8.92□□□□□ -0.98
CHKB-CPT1BH3BT56 PANK2-206ENST00000497424 4815 ntTSL 2 BASIC8.92□□□□□ -0.98
CHKB-CPT1BH3BT56 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC8.92□□□□□ -0.98
CHKB-CPT1BH3BT56 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC8.92□□□□□ -0.98
CHKB-CPT1BH3BT56 SRGAP2C-202ENST00000367123 7204 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
CHKB-CPT1BH3BT56 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC8.92□□□□□ -0.98
CHKB-CPT1BH3BT56 FAM131B-202ENST00000409346 4295 ntAPPRIS P3 TSL 5 BASIC8.92□□□□□ -0.98
CHKB-CPT1BH3BT56 KRT8P11-201ENST00000409686 1436 ntBASIC8.92□□□□□ -0.98
CHKB-CPT1BH3BT56 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
CHKB-CPT1BH3BT56 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
CHKB-CPT1BH3BT56 GTF3C1-201ENST00000356183 7018 ntAPPRIS P3 TSL 1 (best) BASIC8.92□□□□□ -0.98
CHKB-CPT1BH3BT56 BX537318.2-201ENST00000624893 4162 ntBASIC8.92□□□□□ -0.98
CHKB-CPT1BH3BT56 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC8.92□□□□□ -0.98
CHKB-CPT1BH3BT56 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC8.92□□□□□ -0.98
CHKB-CPT1BH3BT56 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
CHKB-CPT1BH3BT56 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC8.92□□□□□ -0.98
CHKB-CPT1BH3BT56 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
CHKB-CPT1BH3BT56 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
CHKB-CPT1BH3BT56 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
CHKB-CPT1BH3BT56 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
CHKB-CPT1BH3BT56 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC8.92□□□□□ -0.98
CHKB-CPT1BH3BT56 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC8.92□□□□□ -0.98
CHKB-CPT1BH3BT56 AP001330.3-201ENST00000520123 633 ntBASIC8.92□□□□□ -0.98
CHKB-CPT1BH3BT56 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC8.92□□□□□ -0.98
CHKB-CPT1BH3BT56 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC8.92□□□□□ -0.98
CHKB-CPT1BH3BT56 RHOD-202ENST00000532559 538 ntTSL 3 BASIC8.92□□□□□ -0.98
CHKB-CPT1BH3BT56 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC8.92□□□□□ -0.98
CHKB-CPT1BH3BT56 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
CHKB-CPT1BH3BT56 HLA-A-209ENST00000638375 975 ntBASIC8.92□□□□□ -0.98
CHKB-CPT1BH3BT56 APLP2-201ENST00000263574 3727 ntAPPRIS P3 TSL 1 (best) BASIC8.92□□□□□ -0.98
CHKB-CPT1BH3BT56 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
CHKB-CPT1BH3BT56 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC8.92□□□□□ -0.98
CHKB-CPT1BH3BT56 USP28-214ENST00000545540 3431 ntTSL 2 BASIC8.92□□□□□ -0.98
CHKB-CPT1BH3BT56 NEK1-201ENST00000439128 5653 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
CHKB-CPT1BH3BT56 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
CHKB-CPT1BH3BT56 STAT4-202ENST00000392320 2822 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
CHKB-CPT1BH3BT56 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
CHKB-CPT1BH3BT56 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC8.92□□□□□ -0.98
CHKB-CPT1BH3BT56 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
CHKB-CPT1BH3BT56 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC8.92□□□□□ -0.98
CHKB-CPT1BH3BT56 KCNJ14-202ENST00000391884 3990 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms