Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC15.9■□□□□ 0.14
TMX2-CTNND1H3BSU7 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC15.9■□□□□ 0.14
TMX2-CTNND1H3BSU7 AC004233.3-201ENST00000607794 1269 ntBASIC15.9■□□□□ 0.14
TMX2-CTNND1H3BSU7 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC15.9■□□□□ 0.14
TMX2-CTNND1H3BSU7 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TMX2-CTNND1H3BSU7 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC15.9■□□□□ 0.14
TMX2-CTNND1H3BSU7 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC15.9■□□□□ 0.14
TMX2-CTNND1H3BSU7 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TMX2-CTNND1H3BSU7 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TMX2-CTNND1H3BSU7 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
TMX2-CTNND1H3BSU7 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
TMX2-CTNND1H3BSU7 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TMX2-CTNND1H3BSU7 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TMX2-CTNND1H3BSU7 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC15.9■□□□□ 0.14
TMX2-CTNND1H3BSU7 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
TMX2-CTNND1H3BSU7 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TMX2-CTNND1H3BSU7 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC15.9■□□□□ 0.14
TMX2-CTNND1H3BSU7 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC15.9■□□□□ 0.14
TMX2-CTNND1H3BSU7 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TMX2-CTNND1H3BSU7 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
TMX2-CTNND1H3BSU7 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TMX2-CTNND1H3BSU7 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC15.89■□□□□ 0.13
TMX2-CTNND1H3BSU7 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TMX2-CTNND1H3BSU7 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TMX2-CTNND1H3BSU7 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
TMX2-CTNND1H3BSU7 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC15.89■□□□□ 0.13
TMX2-CTNND1H3BSU7 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TMX2-CTNND1H3BSU7 FRMD8P1-201ENST00000440433 1524 ntBASIC15.89■□□□□ 0.13
TMX2-CTNND1H3BSU7 AC022144.1-201ENST00000602255 1580 ntBASIC15.89■□□□□ 0.13
TMX2-CTNND1H3BSU7 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TMX2-CTNND1H3BSU7 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TMX2-CTNND1H3BSU7 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
TMX2-CTNND1H3BSU7 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
TMX2-CTNND1H3BSU7 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TMX2-CTNND1H3BSU7 HNRNPA3P1-201ENST00000401429 1139 ntBASIC15.89■□□□□ 0.13
TMX2-CTNND1H3BSU7 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC15.89■□□□□ 0.13
TMX2-CTNND1H3BSU7 HNRNPA3P5-201ENST00000455201 833 ntBASIC15.89■□□□□ 0.13
TMX2-CTNND1H3BSU7 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TMX2-CTNND1H3BSU7 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC15.89■□□□□ 0.13
TMX2-CTNND1H3BSU7 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC15.89■□□□□ 0.13
TMX2-CTNND1H3BSU7 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC15.89■□□□□ 0.13
TMX2-CTNND1H3BSU7 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC15.89■□□□□ 0.13
TMX2-CTNND1H3BSU7 RAB34-223ENST00000636154 730 ntTSL 2 BASIC15.89■□□□□ 0.13
TMX2-CTNND1H3BSU7 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
TMX2-CTNND1H3BSU7 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC15.89■□□□□ 0.13
TMX2-CTNND1H3BSU7 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC15.89■□□□□ 0.13
TMX2-CTNND1H3BSU7 LINC00895-201ENST00000629028 1637 ntBASIC15.89■□□□□ 0.13
TMX2-CTNND1H3BSU7 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TMX2-CTNND1H3BSU7 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
TMX2-CTNND1H3BSU7 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC15.89■□□□□ 0.13
TMX2-CTNND1H3BSU7 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TMX2-CTNND1H3BSU7 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC15.89■□□□□ 0.13
TMX2-CTNND1H3BSU7 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC15.89■□□□□ 0.13
TMX2-CTNND1H3BSU7 CASK-202ENST00000378158 3848 ntTSL 5 BASIC15.89■□□□□ 0.13
TMX2-CTNND1H3BSU7 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TMX2-CTNND1H3BSU7 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TMX2-CTNND1H3BSU7 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TMX2-CTNND1H3BSU7 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TMX2-CTNND1H3BSU7 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TMX2-CTNND1H3BSU7 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
TMX2-CTNND1H3BSU7 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
TMX2-CTNND1H3BSU7 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
TMX2-CTNND1H3BSU7 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TMX2-CTNND1H3BSU7 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TMX2-CTNND1H3BSU7 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC15.88■□□□□ 0.13
TMX2-CTNND1H3BSU7 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC15.88■□□□□ 0.13
TMX2-CTNND1H3BSU7 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC15.88■□□□□ 0.13
TMX2-CTNND1H3BSU7 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
TMX2-CTNND1H3BSU7 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TMX2-CTNND1H3BSU7 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TMX2-CTNND1H3BSU7 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC15.88■□□□□ 0.13
TMX2-CTNND1H3BSU7 GRAP-202ENST00000395635 834 ntTSL 2 BASIC15.88■□□□□ 0.13
TMX2-CTNND1H3BSU7 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC15.88■□□□□ 0.13
TMX2-CTNND1H3BSU7 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC15.88■□□□□ 0.13
TMX2-CTNND1H3BSU7 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TMX2-CTNND1H3BSU7 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TMX2-CTNND1H3BSU7 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC15.88■□□□□ 0.13
TMX2-CTNND1H3BSU7 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TMX2-CTNND1H3BSU7 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC15.88■□□□□ 0.13
TMX2-CTNND1H3BSU7 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TMX2-CTNND1H3BSU7 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TMX2-CTNND1H3BSU7 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
TMX2-CTNND1H3BSU7 QPRT-203ENST00000562473 579 ntTSL 3 BASIC15.88■□□□□ 0.13
TMX2-CTNND1H3BSU7 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC15.88■□□□□ 0.13
TMX2-CTNND1H3BSU7 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
TMX2-CTNND1H3BSU7 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC15.88■□□□□ 0.13
TMX2-CTNND1H3BSU7 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TMX2-CTNND1H3BSU7 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC15.88■□□□□ 0.13
TMX2-CTNND1H3BSU7 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
TMX2-CTNND1H3BSU7 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TMX2-CTNND1H3BSU7 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC15.88■□□□□ 0.13
TMX2-CTNND1H3BSU7 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC15.88■□□□□ 0.13
TMX2-CTNND1H3BSU7 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TMX2-CTNND1H3BSU7 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TMX2-CTNND1H3BSU7 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC15.88■□□□□ 0.13
TMX2-CTNND1H3BSU7 AC092053.1-201ENST00000605787 1936 ntBASIC15.88■□□□□ 0.13
TMX2-CTNND1H3BSU7 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
TMX2-CTNND1H3BSU7 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TMX2-CTNND1H3BSU7 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TMX2-CTNND1H3BSU7 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms