Protein–RNA interactions for Protein: E9PAV3

NACA, Nascent polypeptide-associated complex subunit alpha, muscle-specific form, humanhuman

Predictions only

Length 2,078 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NACAE9PAV3 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
NACAE9PAV3 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
NACAE9PAV3 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC11.9□□□□□ -0.51
NACAE9PAV3 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC11.9□□□□□ -0.51
NACAE9PAV3 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC11.9□□□□□ -0.51
NACAE9PAV3 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC11.9□□□□□ -0.51
NACAE9PAV3 IMP4-203ENST00000409935 958 ntTSL 5 BASIC11.9□□□□□ -0.51
NACAE9PAV3 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC11.9□□□□□ -0.51
NACAE9PAV3 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.51
NACAE9PAV3 PMS2P2-201ENST00000425039 1128 ntBASIC11.9□□□□□ -0.51
NACAE9PAV3 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.51
NACAE9PAV3 DHDH-204ENST00000523250 634 ntTSL 5 BASIC11.9□□□□□ -0.51
NACAE9PAV3 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC11.9□□□□□ -0.51
NACAE9PAV3 AC092865.6-201ENST00000642101 219 ntBASIC11.9□□□□□ -0.51
NACAE9PAV3 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
NACAE9PAV3 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
NACAE9PAV3 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC11.9□□□□□ -0.51
NACAE9PAV3 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
NACAE9PAV3 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
NACAE9PAV3 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC11.89□□□□□ -0.51
NACAE9PAV3 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC11.89□□□□□ -0.51
NACAE9PAV3 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
NACAE9PAV3 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
NACAE9PAV3 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC11.89□□□□□ -0.51
NACAE9PAV3 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
NACAE9PAV3 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
NACAE9PAV3 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
NACAE9PAV3 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC11.89□□□□□ -0.51
NACAE9PAV3 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
NACAE9PAV3 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
NACAE9PAV3 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
NACAE9PAV3 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
NACAE9PAV3 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
NACAE9PAV3 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC11.89□□□□□ -0.51
NACAE9PAV3 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
NACAE9PAV3 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
NACAE9PAV3 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
NACAE9PAV3 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
NACAE9PAV3 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
NACAE9PAV3 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
NACAE9PAV3 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC11.89□□□□□ -0.51
NACAE9PAV3 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC11.89□□□□□ -0.51
NACAE9PAV3 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC11.89□□□□□ -0.51
NACAE9PAV3 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC11.89□□□□□ -0.51
NACAE9PAV3 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC11.89□□□□□ -0.51
NACAE9PAV3 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC11.89□□□□□ -0.51
NACAE9PAV3 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC11.89□□□□□ -0.51
NACAE9PAV3 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC11.89□□□□□ -0.51
NACAE9PAV3 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
NACAE9PAV3 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC11.89□□□□□ -0.51
NACAE9PAV3 AC091167.2-201ENST00000579581 588 ntBASIC11.89□□□□□ -0.51
NACAE9PAV3 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC11.89□□□□□ -0.51
NACAE9PAV3 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC11.89□□□□□ -0.51
NACAE9PAV3 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC11.89□□□□□ -0.51
NACAE9PAV3 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC11.89□□□□□ -0.51
NACAE9PAV3 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC11.89□□□□□ -0.51
NACAE9PAV3 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC11.89□□□□□ -0.51
NACAE9PAV3 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
NACAE9PAV3 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
NACAE9PAV3 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
NACAE9PAV3 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC11.89□□□□□ -0.51
NACAE9PAV3 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
NACAE9PAV3 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC11.89□□□□□ -0.51
NACAE9PAV3 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
NACAE9PAV3 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
NACAE9PAV3 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC11.89□□□□□ -0.51
NACAE9PAV3 AL353732.1-201ENST00000569618 1459 ntBASIC11.89□□□□□ -0.51
NACAE9PAV3 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
NACAE9PAV3 GRK3-201ENST00000324198 9103 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
NACAE9PAV3 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC11.89□□□□□ -0.51
NACAE9PAV3 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
NACAE9PAV3 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
NACAE9PAV3 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
NACAE9PAV3 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
NACAE9PAV3 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC11.88□□□□□ -0.51
NACAE9PAV3 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
NACAE9PAV3 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
NACAE9PAV3 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
NACAE9PAV3 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC11.88□□□□□ -0.51
NACAE9PAV3 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
NACAE9PAV3 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC11.88□□□□□ -0.51
NACAE9PAV3 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
NACAE9PAV3 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
NACAE9PAV3 MRPL20P1-201ENST00000400819 433 ntBASIC11.88□□□□□ -0.51
NACAE9PAV3 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC11.88□□□□□ -0.51
NACAE9PAV3 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC11.88□□□□□ -0.51
NACAE9PAV3 FIS1-203ENST00000442303 631 ntTSL 3 BASIC11.88□□□□□ -0.51
NACAE9PAV3 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
NACAE9PAV3 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC11.88□□□□□ -0.51
NACAE9PAV3 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC11.88□□□□□ -0.51
NACAE9PAV3 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC11.88□□□□□ -0.51
NACAE9PAV3 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
NACAE9PAV3 AP001160.2-201ENST00000596071 487 ntBASIC11.88□□□□□ -0.51
NACAE9PAV3 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC11.88□□□□□ -0.51
NACAE9PAV3 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
NACAE9PAV3 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
NACAE9PAV3 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
NACAE9PAV3 PGR-209ENST00000617858 2816 ntTSL 5 BASIC11.88□□□□□ -0.51
NACAE9PAV3 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
NACAE9PAV3 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC11.88□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms