Protein–RNA interactions for Protein: A8K830

COLCA2, Colorectal cancer-associated protein 2, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2A8K830 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
COLCA2A8K830 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC12.37□□□□□ -0.43
COLCA2A8K830 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
COLCA2A8K830 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC12.37□□□□□ -0.43
COLCA2A8K830 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
COLCA2A8K830 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
COLCA2A8K830 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC12.37□□□□□ -0.43
COLCA2A8K830 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC12.37□□□□□ -0.43
COLCA2A8K830 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
COLCA2A8K830 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
COLCA2A8K830 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
COLCA2A8K830 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC12.37□□□□□ -0.43
COLCA2A8K830 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
COLCA2A8K830 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
COLCA2A8K830 RBSN-207ENST00000476527 3005 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
COLCA2A8K830 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
COLCA2A8K830 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
COLCA2A8K830 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
COLCA2A8K830 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
COLCA2A8K830 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
COLCA2A8K830 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
COLCA2A8K830 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
COLCA2A8K830 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
COLCA2A8K830 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
COLCA2A8K830 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC12.36□□□□□ -0.43
COLCA2A8K830 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
COLCA2A8K830 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
COLCA2A8K830 MTHFR-210ENST00000641407 2387 ntBASIC12.36□□□□□ -0.43
COLCA2A8K830 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC12.36□□□□□ -0.43
COLCA2A8K830 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC12.36□□□□□ -0.43
COLCA2A8K830 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
COLCA2A8K830 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
COLCA2A8K830 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC12.36□□□□□ -0.43
COLCA2A8K830 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
COLCA2A8K830 AL353732.1-201ENST00000569618 1459 ntBASIC12.36□□□□□ -0.43
COLCA2A8K830 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
COLCA2A8K830 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC12.36□□□□□ -0.43
COLCA2A8K830 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
COLCA2A8K830 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
COLCA2A8K830 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
COLCA2A8K830 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
COLCA2A8K830 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
COLCA2A8K830 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
COLCA2A8K830 SLC9A7P1-202ENST00000556476 2239 ntBASIC12.36□□□□□ -0.43
COLCA2A8K830 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
COLCA2A8K830 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
COLCA2A8K830 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
COLCA2A8K830 HES2-202ENST00000377836 507 ntTSL 2 BASIC12.36□□□□□ -0.43
COLCA2A8K830 HSCB-202ENST00000398941 955 ntTSL 2 BASIC12.36□□□□□ -0.43
COLCA2A8K830 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
COLCA2A8K830 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC12.36□□□□□ -0.43
COLCA2A8K830 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC12.36□□□□□ -0.43
COLCA2A8K830 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC12.36□□□□□ -0.43
COLCA2A8K830 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC12.36□□□□□ -0.43
COLCA2A8K830 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC12.36□□□□□ -0.43
COLCA2A8K830 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC12.36□□□□□ -0.43
COLCA2A8K830 AC133552.2-202ENST00000575694 574 ntBASIC12.36□□□□□ -0.43
COLCA2A8K830 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC12.36□□□□□ -0.43
COLCA2A8K830 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC12.36□□□□□ -0.43
COLCA2A8K830 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC12.36□□□□□ -0.43
COLCA2A8K830 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC12.36□□□□□ -0.43
COLCA2A8K830 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
COLCA2A8K830 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
COLCA2A8K830 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
COLCA2A8K830 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
COLCA2A8K830 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
COLCA2A8K830 EML1-203ENST00000334192 4064 ntTSL 5 BASIC12.36□□□□□ -0.43
COLCA2A8K830 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC12.36□□□□□ -0.43
COLCA2A8K830 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
COLCA2A8K830 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
COLCA2A8K830 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
COLCA2A8K830 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
COLCA2A8K830 TXNDC12-201ENST00000371626 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
COLCA2A8K830 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
COLCA2A8K830 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
COLCA2A8K830 KRT8P39-201ENST00000396270 1433 ntBASIC12.36□□□□□ -0.43
COLCA2A8K830 ACIN1-202ENST00000338631 2445 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
COLCA2A8K830 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
COLCA2A8K830 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC12.35□□□□□ -0.43
COLCA2A8K830 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
COLCA2A8K830 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC12.35□□□□□ -0.43
COLCA2A8K830 CD22-209ENST00000594250 2107 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
COLCA2A8K830 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
COLCA2A8K830 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
COLCA2A8K830 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC12.35□□□□□ -0.43
COLCA2A8K830 TVP23C-CDRT4-203ENST00000522212 2833 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
COLCA2A8K830 MANBAL-201ENST00000373605 1915 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
COLCA2A8K830 PBK-203ENST00000522944 1499 ntTSL 2 BASIC12.35□□□□□ -0.43
COLCA2A8K830 TTC14-202ENST00000382584 2274 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
COLCA2A8K830 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
COLCA2A8K830 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
COLCA2A8K830 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
COLCA2A8K830 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
COLCA2A8K830 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
COLCA2A8K830 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
COLCA2A8K830 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC12.35□□□□□ -0.43
COLCA2A8K830 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
COLCA2A8K830 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
COLCA2A8K830 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
COLCA2A8K830 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms