Protein–RNA interactions for Protein: A0A1B0GUT2

LINC00959, HCG1648656, isoform CRA_a, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959A0A1B0GUT2 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
LINC00959A0A1B0GUT2 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
LINC00959A0A1B0GUT2 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC11.04□□□□□ -0.64
LINC00959A0A1B0GUT2 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
LINC00959A0A1B0GUT2 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
LINC00959A0A1B0GUT2 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
LINC00959A0A1B0GUT2 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC11.04□□□□□ -0.64
LINC00959A0A1B0GUT2 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC11.04□□□□□ -0.64
LINC00959A0A1B0GUT2 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
LINC00959A0A1B0GUT2 AC245100.5-201ENST00000452108 331 ntBASIC11.04□□□□□ -0.64
LINC00959A0A1B0GUT2 HS6ST1P1-201ENST00000481504 1234 ntBASIC11.04□□□□□ -0.64
LINC00959A0A1B0GUT2 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC11.04□□□□□ -0.64
LINC00959A0A1B0GUT2 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
LINC00959A0A1B0GUT2 CFL1-202ENST00000524553 860 ntTSL 2 BASIC11.04□□□□□ -0.64
LINC00959A0A1B0GUT2 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC11.04□□□□□ -0.64
LINC00959A0A1B0GUT2 AC109635.5-201ENST00000533593 962 ntBASIC11.04□□□□□ -0.64
LINC00959A0A1B0GUT2 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC11.04□□□□□ -0.64
LINC00959A0A1B0GUT2 QPRT-203ENST00000562473 579 ntTSL 3 BASIC11.04□□□□□ -0.64
LINC00959A0A1B0GUT2 AL009183.1-201ENST00000603760 355 ntBASIC11.04□□□□□ -0.64
LINC00959A0A1B0GUT2 PRKN-208ENST00000610470 531 ntTSL 2 BASIC11.04□□□□□ -0.64
LINC00959A0A1B0GUT2 PRKN-209ENST00000612485 225 ntTSL 5 BASIC11.04□□□□□ -0.64
LINC00959A0A1B0GUT2 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC11.04□□□□□ -0.64
LINC00959A0A1B0GUT2 AL773604.1-201ENST00000617417 272 ntBASIC11.04□□□□□ -0.64
LINC00959A0A1B0GUT2 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC11.04□□□□□ -0.64
LINC00959A0A1B0GUT2 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
LINC00959A0A1B0GUT2 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
LINC00959A0A1B0GUT2 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
LINC00959A0A1B0GUT2 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
LINC00959A0A1B0GUT2 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC11.04□□□□□ -0.64
LINC00959A0A1B0GUT2 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
LINC00959A0A1B0GUT2 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
LINC00959A0A1B0GUT2 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
LINC00959A0A1B0GUT2 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
LINC00959A0A1B0GUT2 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
LINC00959A0A1B0GUT2 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
LINC00959A0A1B0GUT2 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
LINC00959A0A1B0GUT2 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
LINC00959A0A1B0GUT2 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
LINC00959A0A1B0GUT2 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC11.04□□□□□ -0.64
LINC00959A0A1B0GUT2 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
LINC00959A0A1B0GUT2 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC11.04□□□□□ -0.64
LINC00959A0A1B0GUT2 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC11.04□□□□□ -0.64
LINC00959A0A1B0GUT2 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
LINC00959A0A1B0GUT2 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC11.04□□□□□ -0.64
LINC00959A0A1B0GUT2 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
LINC00959A0A1B0GUT2 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC11.04□□□□□ -0.64
LINC00959A0A1B0GUT2 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
LINC00959A0A1B0GUT2 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
LINC00959A0A1B0GUT2 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
LINC00959A0A1B0GUT2 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC11.03□□□□□ -0.64
LINC00959A0A1B0GUT2 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
LINC00959A0A1B0GUT2 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC11.03□□□□□ -0.64
LINC00959A0A1B0GUT2 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LINC00959A0A1B0GUT2 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC11.03□□□□□ -0.64
LINC00959A0A1B0GUT2 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LINC00959A0A1B0GUT2 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC11.03□□□□□ -0.64
LINC00959A0A1B0GUT2 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LINC00959A0A1B0GUT2 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC11.03□□□□□ -0.64
LINC00959A0A1B0GUT2 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LINC00959A0A1B0GUT2 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC11.03□□□□□ -0.64
LINC00959A0A1B0GUT2 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC11.03□□□□□ -0.64
LINC00959A0A1B0GUT2 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC11.03□□□□□ -0.64
LINC00959A0A1B0GUT2 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC11.03□□□□□ -0.64
LINC00959A0A1B0GUT2 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC11.03□□□□□ -0.64
LINC00959A0A1B0GUT2 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LINC00959A0A1B0GUT2 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LINC00959A0A1B0GUT2 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
LINC00959A0A1B0GUT2 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
LINC00959A0A1B0GUT2 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
LINC00959A0A1B0GUT2 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LINC00959A0A1B0GUT2 DDT-204ENST00000404092 805 ntTSL 3 BASIC11.03□□□□□ -0.64
LINC00959A0A1B0GUT2 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
LINC00959A0A1B0GUT2 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
LINC00959A0A1B0GUT2 AC098831.1-202ENST00000438821 336 ntBASIC11.03□□□□□ -0.64
LINC00959A0A1B0GUT2 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
LINC00959A0A1B0GUT2 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
LINC00959A0A1B0GUT2 MDH2-205ENST00000461263 648 ntTSL 2 BASIC11.03□□□□□ -0.64
LINC00959A0A1B0GUT2 AC093909.1-201ENST00000504731 1122 ntBASIC11.03□□□□□ -0.64
LINC00959A0A1B0GUT2 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC11.03□□□□□ -0.64
LINC00959A0A1B0GUT2 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC11.03□□□□□ -0.64
LINC00959A0A1B0GUT2 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC11.03□□□□□ -0.64
LINC00959A0A1B0GUT2 THTPA-204ENST00000554970 569 ntTSL 4 BASIC11.03□□□□□ -0.64
LINC00959A0A1B0GUT2 THTPA-206ENST00000556015 535 ntTSL 3 BASIC11.03□□□□□ -0.64
LINC00959A0A1B0GUT2 RPL28-209ENST00000560055 670 ntTSL 3 BASIC11.03□□□□□ -0.64
LINC00959A0A1B0GUT2 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC11.03□□□□□ -0.64
LINC00959A0A1B0GUT2 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
LINC00959A0A1B0GUT2 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC11.03□□□□□ -0.64
LINC00959A0A1B0GUT2 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC11.03□□□□□ -0.64
LINC00959A0A1B0GUT2 AL078644.1-201ENST00000609881 752 ntBASIC11.03□□□□□ -0.64
LINC00959A0A1B0GUT2 AC007064.4-201ENST00000637740 555 ntBASIC11.03□□□□□ -0.64
LINC00959A0A1B0GUT2 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC11.03□□□□□ -0.64
LINC00959A0A1B0GUT2 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
LINC00959A0A1B0GUT2 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
LINC00959A0A1B0GUT2 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
LINC00959A0A1B0GUT2 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LINC00959A0A1B0GUT2 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
LINC00959A0A1B0GUT2 AL365209.1-201ENST00000624418 6473 ntBASIC11.03□□□□□ -0.64
LINC00959A0A1B0GUT2 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC11.03□□□□□ -0.64
LINC00959A0A1B0GUT2 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
LINC00959A0A1B0GUT2 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms