Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC8.29□□□□□ -1.08
LINC01558Q9Y6Z2 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
LINC01558Q9Y6Z2 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC8.29□□□□□ -1.08
LINC01558Q9Y6Z2 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
LINC01558Q9Y6Z2 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC8.29□□□□□ -1.08
LINC01558Q9Y6Z2 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
LINC01558Q9Y6Z2 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
LINC01558Q9Y6Z2 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
LINC01558Q9Y6Z2 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC8.29□□□□□ -1.08
LINC01558Q9Y6Z2 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
LINC01558Q9Y6Z2 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC8.29□□□□□ -1.08
LINC01558Q9Y6Z2 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
LINC01558Q9Y6Z2 MIR572-201ENST00000384983 95 ntBASIC8.29□□□□□ -1.08
LINC01558Q9Y6Z2 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC8.29□□□□□ -1.08
LINC01558Q9Y6Z2 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC8.29□□□□□ -1.08
LINC01558Q9Y6Z2 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC8.29□□□□□ -1.08
LINC01558Q9Y6Z2 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC8.29□□□□□ -1.08
LINC01558Q9Y6Z2 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC8.29□□□□□ -1.08
LINC01558Q9Y6Z2 NAT14-202ENST00000587400 416 ntTSL 5 BASIC8.29□□□□□ -1.08
LINC01558Q9Y6Z2 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC8.29□□□□□ -1.08
LINC01558Q9Y6Z2 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC8.29□□□□□ -1.08
LINC01558Q9Y6Z2 AL589743.5-201ENST00000616611 1050 ntBASIC8.29□□□□□ -1.08
LINC01558Q9Y6Z2 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC8.29□□□□□ -1.08
LINC01558Q9Y6Z2 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
LINC01558Q9Y6Z2 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
LINC01558Q9Y6Z2 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
LINC01558Q9Y6Z2 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC8.29□□□□□ -1.08
LINC01558Q9Y6Z2 KRT8P47-201ENST00000604727 1398 ntBASIC8.29□□□□□ -1.08
LINC01558Q9Y6Z2 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
LINC01558Q9Y6Z2 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
LINC01558Q9Y6Z2 C10orf105-202ENST00000441508 4836 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
LINC01558Q9Y6Z2 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
LINC01558Q9Y6Z2 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
LINC01558Q9Y6Z2 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
LINC01558Q9Y6Z2 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
LINC01558Q9Y6Z2 AL357140.3-201ENST00000639753 1983 ntBASIC8.29□□□□□ -1.08
LINC01558Q9Y6Z2 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
LINC01558Q9Y6Z2 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC8.29□□□□□ -1.08
LINC01558Q9Y6Z2 LOXL4-201ENST00000260702 3653 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
LINC01558Q9Y6Z2 AC004899.2-201ENST00000622993 3860 ntBASIC8.29□□□□□ -1.08
LINC01558Q9Y6Z2 NIN-202ENST00000324330 4364 ntTSL 5 BASIC8.29□□□□□ -1.08
LINC01558Q9Y6Z2 RNF43-208ENST00000584437 5575 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
LINC01558Q9Y6Z2 KLHL8-201ENST00000273963 5621 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
LINC01558Q9Y6Z2 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
LINC01558Q9Y6Z2 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC8.29□□□□□ -1.08
LINC01558Q9Y6Z2 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC8.29□□□□□ -1.08
LINC01558Q9Y6Z2 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
LINC01558Q9Y6Z2 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
LINC01558Q9Y6Z2 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC8.29□□□□□ -1.08
LINC01558Q9Y6Z2 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
LINC01558Q9Y6Z2 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
LINC01558Q9Y6Z2 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC8.29□□□□□ -1.08
LINC01558Q9Y6Z2 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC8.29□□□□□ -1.08
LINC01558Q9Y6Z2 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC8.29□□□□□ -1.08
LINC01558Q9Y6Z2 LINC00167-201ENST00000530583 1419 ntBASIC8.29□□□□□ -1.08
LINC01558Q9Y6Z2 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC8.29□□□□□ -1.08
LINC01558Q9Y6Z2 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
LINC01558Q9Y6Z2 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC8.28□□□□□ -1.08
LINC01558Q9Y6Z2 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC8.28□□□□□ -1.08
LINC01558Q9Y6Z2 TRPC6-201ENST00000344327 4612 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
LINC01558Q9Y6Z2 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC8.28□□□□□ -1.08
LINC01558Q9Y6Z2 C1orf167-202ENST00000433342 4545 ntAPPRIS P5 TSL 5 BASIC8.28□□□□□ -1.08
LINC01558Q9Y6Z2 TROVE2-208ENST00000432079 7848 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
LINC01558Q9Y6Z2 LPO-204ENST00000543544 2350 ntTSL 2 BASIC8.28□□□□□ -1.08
LINC01558Q9Y6Z2 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
LINC01558Q9Y6Z2 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
LINC01558Q9Y6Z2 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC8.28□□□□□ -1.08
LINC01558Q9Y6Z2 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
LINC01558Q9Y6Z2 AC018442.1-201ENST00000421439 2061 ntBASIC8.28□□□□□ -1.08
LINC01558Q9Y6Z2 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC8.28□□□□□ -1.08
LINC01558Q9Y6Z2 AC016245.1-201ENST00000570335 3204 ntTSL 2 BASIC8.28□□□□□ -1.08
LINC01558Q9Y6Z2 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
LINC01558Q9Y6Z2 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC8.28□□□□□ -1.08
LINC01558Q9Y6Z2 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC8.28□□□□□ -1.08
LINC01558Q9Y6Z2 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC8.28□□□□□ -1.08
LINC01558Q9Y6Z2 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
LINC01558Q9Y6Z2 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
LINC01558Q9Y6Z2 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
LINC01558Q9Y6Z2 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
LINC01558Q9Y6Z2 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC8.28□□□□□ -1.08
LINC01558Q9Y6Z2 USP4-203ENST00000415188 1454 ntTSL 3 BASIC8.28□□□□□ -1.08
LINC01558Q9Y6Z2 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
LINC01558Q9Y6Z2 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
LINC01558Q9Y6Z2 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
LINC01558Q9Y6Z2 NISCH-212ENST00000488380 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
LINC01558Q9Y6Z2 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
LINC01558Q9Y6Z2 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
LINC01558Q9Y6Z2 MIR639-201ENST00000384974 98 ntBASIC8.28□□□□□ -1.08
LINC01558Q9Y6Z2 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC8.28□□□□□ -1.08
LINC01558Q9Y6Z2 RPS2P52-201ENST00000469610 820 ntBASIC8.28□□□□□ -1.08
LINC01558Q9Y6Z2 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC8.28□□□□□ -1.08
LINC01558Q9Y6Z2 AC012414.1-201ENST00000556676 535 ntBASIC8.28□□□□□ -1.08
LINC01558Q9Y6Z2 RGMA-211ENST00000557420 989 ntTSL 3 BASIC8.28□□□□□ -1.08
LINC01558Q9Y6Z2 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC8.28□□□□□ -1.08
LINC01558Q9Y6Z2 RAP2CP1-201ENST00000605103 478 ntBASIC8.28□□□□□ -1.08
LINC01558Q9Y6Z2 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
LINC01558Q9Y6Z2 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
LINC01558Q9Y6Z2 KRT42P-202ENST00000438131 2895 ntTSL 2 BASIC8.28□□□□□ -1.08
LINC01558Q9Y6Z2 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
LINC01558Q9Y6Z2 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC8.28□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms